SMTL ID : 1ldk.2 (1 other biounit)

Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF Ubiquitin Ligase Complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-2-2-2-2-2-mer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain C: C.24, C.27, C.35, H.62, C.65, R.68 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.24, C:C.27, C:H.62, C:C.65 ZN.2: 4 residues within 4Å: Chain C: C.57, H.59, C.76, D.79 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:C.57, C:H.59, C:H.59, C:C.76, C:D.79 ZN.3: 4 residues within 4Å: Chain C: C.35, C.38, C.50, H.64 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.35, C:C.38, C:C.50, C:H.64 ZN.4: 6 residues within 4Å: Chain H: C.24, C.27, C.35, H.62, C.65, R.68 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:C.24, H:C.27, H:H.62, H:C.65 ZN.5: 4 residues within 4Å: Chain H: C.57, H.59, C.76, D.79 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:C.57, H:H.59, H:H.59, H:C.76, H:D.79 ZN.6: 4 residues within 4Å: Chain H: C.35, C.38, C.50, H.64 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:C.35, H:C.38, H:C.50, H:H.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, N. et al., Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF ubiquitin ligase complex. Nature (2002)

Release Date

2002-05-08

Peptides

CULLIN HOMOLOG: AF
CULLIN HOMOLOG: BG
ring-box protein 1: CH
CYCLIN A/CDK2-ASSOCIATED PROTEIN P19: DI
SKP2-like protein type gamma: EJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

F
A

B
B

G
B

C
C

H
C

D
D

I
D

E
E

J
E

CULLIN HOMOLOG

CULLIN HOMOLOG

ring-box protein 1

CYCLIN A/CDK2-ASSOCIATED PROTEIN P19

SKP2-like protein type gamma

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