SMTL ID : 1ljm.3 (3 other biounits)

DNA recognition is mediated by conformational transition and by DNA bending

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

10 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: N.62, A.65, E.66, G.88 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain B: N.105 Chain D: T.104, N.105 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain B: N.19, G.45, V.47, Q.108 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain B: N.62, A.65, E.66, G.88 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain B: R.89, R.92, T.119, V.120 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain C: N.62, A.65, E.66, G.88 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain B: T.104, N.105 Chain D: N.105 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain D: N.19, G.45, V.47, Q.108 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain D: N.62, A.65, E.66, G.88 Ligand excluded by PLIP CL.10: 4 residues within 4Å: Chain D: R.89, R.92, T.119, V.120 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bartfeld, D. et al., DNA Recognition by the RUNX1 Transcription Factor Is Mediated by an Allosteric Transition in the RUNT Domain and by DNA Bending. Structure

Release Date

2002-11-06

Peptides

RUNX1 transcription factor: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

RUNX1 transcription factor

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