SMTL ID : 1ll1.1

HYDROXO BRIDGE MET FORM HEMOCYANIN FROM LIMULUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-hexamer

Ligands

12 x CU: COPPER (II) ION(Non-covalent)

CU.1: 5 residues within 4Å: Chain A: H.204, H.324, H.328, H.364 Ligands: CU.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.324, A:H.328, A:H.364, H2O.2, H2O.4 CU.2: 4 residues within 4Å: Chain A: H.173, H.177, H.204 Ligands: CU.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.173, A:H.177, A:H.204, H2O.2, H2O.4 CU.4: 5 residues within 4Å: Chain B: H.204, H.324, H.328, H.364 Ligands: CU.5 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.324, B:H.328, B:H.364, H2O.7, H2O.10 CU.5: 4 residues within 4Å: Chain B: H.173, H.177, H.204 Ligands: CU.4 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.173, B:H.177, B:H.204, H2O.7, H2O.10 CU.7: 5 residues within 4Å: Chain C: H.204, H.324, H.328, H.364 Ligands: CU.8 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.324, C:H.328, C:H.364, H2O.13, H2O.15 CU.8: 4 residues within 4Å: Chain C: H.173, H.177, H.204 Ligands: CU.7 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.173, C:H.177, C:H.204, H2O.13, H2O.15 CU.10: 5 residues within 4Å: Chain D: H.204, H.324, H.328, H.364 Ligands: CU.11 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.324, D:H.328, D:H.364, H2O.18, H2O.20 CU.11: 4 residues within 4Å: Chain D: H.173, H.177, H.204 Ligands: CU.10 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.173, D:H.177, D:H.204, H2O.18, H2O.20 CU.13: 5 residues within 4Å: Chain E: H.204, H.324, H.328, H.364 Ligands: CU.14 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:H.324, E:H.328, E:H.364, H2O.23, H2O.25 CU.14: 4 residues within 4Å: Chain E: H.173, H.177, H.204 Ligands: CU.13 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:H.173, E:H.177, E:H.204, H2O.23, H2O.25 CU.16: 5 residues within 4Å: Chain F: H.204, H.324, H.328, H.364 Ligands: CU.17 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:H.324, F:H.328, F:H.364, H2O.29, H2O.31 CU.17: 4 residues within 4Å: Chain F: H.173, H.177, H.204 Ligands: CU.16 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:H.173, F:H.177, F:H.204, H2O.29, H2O.31

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: S.47, V.329, R.333, S.349 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain B: S.47, V.329, R.333, S.349 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain C: S.47, V.329, R.333, S.349 Ligand excluded by PLIP CL.12: 4 residues within 4Å: Chain D: S.47, V.329, R.333, S.349 Ligand excluded by PLIP CL.15: 4 residues within 4Å: Chain E: S.47, V.329, R.333, S.349 Ligand excluded by PLIP CL.18: 4 residues within 4Å: Chain F: S.47, V.329, R.333, S.349 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, S. et al., Crystallographic Studies of Hydroxo, Nitrosyl, Azido and Fluro met Form Hemocyanin Subunit II from Limulus. To be Published

Release Date

1997-08-20

Peptides

METCYANIN II: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

METCYANIN II