SMTL ID : 1llc.1 (1 other biounit)

STRUCTURE DETERMINATION OF THE ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS CASEI AT 3.0 ANGSTROMS RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-tetramer

Ligands

4 x AFP: 1,6-di-O-phosphono-alpha-D-fructofuranose(Post Translational Modification)

AFP.1: 14 residues within 4Å: Chain A: T.154, R.158, V.172, H.173, A.174, Y.175, R.244, V.256, L.257 Chain C: R.170, S.171, H.173 Chain D: P.58, F.59 9 PLIP interactions: 7 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:T.154, A:R.158, A:A.174, A:Y.175, A:V.256, C:S.171 Salt bridges: A:H.173, A:R.244, C:H.173 AFP.3: 25 residues within 4Å: Chain B: T.154, R.158, V.172, H.173, A.174, Y.175, R.244, V.256, L.257 Chain C: A.18, V.19, G.20, S.21, S.22, Y.23, A.24, F.25, A.26, M.27, F.235, Y.236, G.237, I.238, A.239, T.240 12 PLIP interactions: 7 interactions with chain C, 5 interactions with chain B Hydrogen bonds: C:S.21, C:M.27, C:F.235, C:Y.236, C:I.238, C:A.239, C:T.240, B:T.154, B:R.158, B:A.174 Salt bridges: B:H.173, B:R.244 AFP.5: 12 residues within 4Å: Chain A: R.170, S.171, H.173 Chain C: T.154, R.158, V.172, H.173, A.174, Y.175, R.244, V.256, L.257 9 PLIP interactions: 2 interactions with chain A, 7 interactions with chain C Hydrogen bonds: A:S.171, C:T.154, C:R.158, C:A.174, C:Y.175, C:V.256 Salt bridges: A:H.173, C:H.173, C:R.244 AFP.7: 21 residues within 4Å: Chain A: P.58, F.59 Chain B: V.28, D.52, L.53, S.54, N.55, A.56, L.57, P.58, F.59, T.60 Chain D: T.154, R.158, V.172, H.173, A.174, Y.175, R.244, V.256, L.257 9 PLIP interactions: 5 interactions with chain D, 4 interactions with chain B Hydrogen bonds: D:T.154, D:R.158, D:L.257, B:D.52, B:L.57, B:P.58, B:T.60 Salt bridges: D:H.173, D:R.244

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: L.152, R.156, H.180, A.224, T.234 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.156, A:H.180 SO4.4: 7 residues within 4Å: Chain B: L.152, R.156, H.180, A.224, T.234 Chain C: I.51, N.55 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.156, B:H.180 SO4.6: 5 residues within 4Å: Chain C: L.152, R.156, H.180, A.224, T.234 2 PLIP interactions: 2 interactions with chain C Salt bridges: C:R.156, C:H.180 SO4.8: 5 residues within 4Å: Chain D: L.152, R.156, H.180, A.224, T.234 2 PLIP interactions: 2 interactions with chain D Salt bridges: D:R.156, D:H.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buehner, M. et al., STRUCTURE DETERMINATION OF THE ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS-CASEI AT 3A RESOLUTION. Acta Crystallogr.,Sect.A (1984)

Release Date

1989-07-12

Peptides

L-LACTATE DEHYDROGENASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

L-LACTATE DEHYDROGENASE

Related Entries With Identical Sequence