- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x CD: CADMIUM ION(Non-covalent)
CD.2: 5 residues within 4Å:- Chain A: C.11, K.46, E.222, D.233
- Ligands: PEP.3
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.11, A:E.222, A:E.222, A:D.233
CD.5: 5 residues within 4Å:- Chain B: C.11, K.46, E.222, D.233
- Ligands: PEP.6
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:C.11, B:E.222, B:E.222, B:D.233
CD.8: 5 residues within 4Å:- Chain C: C.11, K.46, E.222, D.233
- Ligands: PEP.9
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:C.11, C:E.222, C:E.222, C:D.233
CD.11: 5 residues within 4Å:- Chain D: C.11, K.46, E.222, D.233
- Ligands: PEP.12
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:C.11, D:E.222, D:E.222, D:D.233
- 4 x PEP: PHOSPHOENOLPYRUVATE(Non-functional Binders)
PEP.3: 10 residues within 4Å:- Chain A: C.11, K.46, N.48, P.101, A.102, K.124, R.154, E.222, D.233
- Ligands: CD.2
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:A.102
- Water bridges: A:K.41, A:K.41, A:N.48, A:N.48, A:N.48, A:K.124, A:K.124, A:R.154
- Salt bridges: A:K.41, A:K.46, A:K.124, A:K.124, A:R.154
PEP.6: 10 residues within 4Å:- Chain B: C.11, K.46, N.48, P.101, A.102, K.124, R.154, E.222, D.233
- Ligands: CD.5
15 PLIP interactions:15 interactions with chain B- Hydrogen bonds: B:A.102
- Water bridges: B:K.41, B:K.41, B:S.43, B:N.48, B:N.48, B:N.48, B:N.48, B:F.103, B:K.124, B:Q.127
- Salt bridges: B:K.41, B:K.46, B:K.124, B:R.154
PEP.9: 10 residues within 4Å:- Chain C: C.11, K.46, N.48, P.101, A.102, K.124, R.154, E.222, D.233
- Ligands: CD.8
14 PLIP interactions:14 interactions with chain C- Hydrogen bonds: C:A.102
- Water bridges: C:K.41, C:K.41, C:N.48, C:N.48, C:N.48, C:K.124, C:K.124, C:R.154
- Salt bridges: C:K.41, C:K.46, C:K.124, C:K.124, C:R.154
PEP.12: 10 residues within 4Å:- Chain D: C.11, K.46, N.48, P.101, A.102, K.124, R.154, E.222, D.233
- Ligands: CD.11
15 PLIP interactions:15 interactions with chain D- Hydrogen bonds: D:A.102
- Water bridges: D:K.41, D:K.41, D:S.43, D:N.48, D:N.48, D:N.48, D:N.48, D:F.103, D:K.124, D:Q.127
- Salt bridges: D:K.41, D:K.46, D:K.124, D:R.154
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, J. et al., Function of His185 in Aquifex aeolicus 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase. J.Mol.Biol. (2002)
- Release Date
- 2002-11-27
- Peptides
- KDO-8-phosphate synthetase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x CD: CADMIUM ION(Non-covalent)
- 4 x PEP: PHOSPHOENOLPYRUVATE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, J. et al., Function of His185 in Aquifex aeolicus 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase. J.Mol.Biol. (2002)
- Release Date
- 2002-11-27
- Peptides
- KDO-8-phosphate synthetase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B