SMTL ID : 1lxj.1

X-RAY STRUCTURE OF YBL001c NORTHEAST STRUCTURAL GENOMICS (NESG) CONSORTIUM TARGET YTYst72

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: R.84, K.87, Q.89 Chain B: S.21, I.22, S.23 Chain C: R.74 11 PLIP interactions: 3 interactions with chain B, 5 interactions with chain A, 3 interactions with chain C Hydrogen bonds: B:S.21, B:I.22, B:S.23, A:Q.89 Water bridges: A:K.87, A:K.94, C:R.74, C:R.74 Salt bridges: A:R.84, A:K.87, C:R.74 SO4.2: 7 residues within 4Å: Chain A: S.21, I.22, S.23 Chain B: R.84, K.87, Q.89 Chain D: R.74 11 PLIP interactions: 3 interactions with chain D, 5 interactions with chain B, 3 interactions with chain A Water bridges: D:R.74, D:R.74, B:K.87, B:K.94 Salt bridges: D:R.74, B:R.84, B:K.87 Hydrogen bonds: B:Q.89, A:S.21, A:I.22, A:S.23 SO4.3: 7 residues within 4Å: Chain A: R.74 Chain C: R.84, K.87, Q.89 Chain D: S.21, I.22, S.23 11 PLIP interactions: 3 interactions with chain D, 5 interactions with chain C, 3 interactions with chain A Hydrogen bonds: D:S.21, D:I.22, D:S.23, C:Q.89 Water bridges: C:K.87, C:K.94, A:R.74, A:R.74 Salt bridges: C:R.84, C:K.87, A:R.74 SO4.4: 7 residues within 4Å: Chain B: R.74 Chain C: S.21, I.22, S.23 Chain D: R.84, K.87, Q.89 11 PLIP interactions: 5 interactions with chain D, 3 interactions with chain C, 3 interactions with chain B Hydrogen bonds: D:Q.89, C:S.21, C:I.22, C:S.23 Water bridges: D:K.87, D:K.94, B:R.74, B:R.74 Salt bridges: D:R.84, D:K.87, B:R.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tao, X. et al., CRYSTAL STRUCTURES OF MTH1187 AND ITS YEAST ORTHOLOG YBL001C. Proteins (2003)

Release Date

2003-07-29

Peptides

HYPOTHETICAL 11.5KDA PROTEIN IN HTB2-NTH2 INTERGENIC REGION: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

HYPOTHETICAL 11.5KDA PROTEIN IN HTB2-NTH2 INTERGENIC REGION