SMTL ID : 1m4y.1

Crystal structure of HslV from Thermotoga maritima

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-12-mer

Ligands

12 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.156 NA.2: 3 residues within 4Å: Chain B: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.156 NA.3: 4 residues within 4Å: Chain C: G.156, C.159, I.160, T.162 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:G.156 NA.4: 3 residues within 4Å: Chain D: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:T.162 NA.5: 3 residues within 4Å: Chain E: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:T.162 NA.6: 4 residues within 4Å: Chain F: G.156, C.159, I.160, T.162 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:T.162 NA.7: 3 residues within 4Å: Chain G: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:T.162 NA.8: 3 residues within 4Å: Chain H: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:G.156 NA.9: 4 residues within 4Å: Chain I: G.156, C.159, I.160, T.162 1 PLIP interactions: 1 interactions with chain I Hydrogen bonds: I:T.162 NA.10: 3 residues within 4Å: Chain J: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain J Hydrogen bonds: J:C.159 NA.11: 3 residues within 4Å: Chain K: G.156, C.159, T.162 1 PLIP interactions: 1 interactions with chain K Hydrogen bonds: K:G.156 NA.12: 4 residues within 4Å: Chain L: G.156, C.159, I.160, T.162 1 PLIP interactions: 1 interactions with chain L Hydrogen bonds: L:G.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, H.K. et al., Isolation and characterization of the prokaryotic proteasome homolog HslVU (ClpQY) from Thermotoga maritima and the crystal structure of HslV. BIOPHYS.CHEM. (2003)

Release Date

2003-05-06

Peptides

ATP-dependent protease hslV: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

G
A

H
B

I
C

J
A

K
B

L
C

ATP-dependent protease hslV