SMTL ID : 1mck.1

PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

1 x ACE- DGL- HIS- DPR- NH2: PEPTIDE N-ACETYL-D-GLU-L-HIS-D-PRO-NH2(Non-covalent)

ACE-DGL-HIS-DPR-NH2.1: 10 residues within 4Å: Chain A: Y.34, Y.93, D.97, F.99 Chain B: Y.34, S.36, Y.51, E.52, Y.93, F.99 3 PLIP interactions: 1 interactions with chain B, 1 Ligand-Ligand interactions, 1 interactions with chain A Hydrophobic interactions: B:F.99, B:Y.34, A:F.99 Hydrogen bonds: H.0, B:S.36, B:E.52, B:Y.34, A:Y.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edmundson, A.B. et al., Principles and pitfalls in designing site-directed peptide ligands. Proteins (1993)

Release Date

1994-01-31

Peptides

IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN)

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