SMTL ID : 1mdo.2 (1 other biounit)

Crystal structure of ArnB aminotransferase with pyridomine 5' phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE(Non-covalent)

PMP.1: 16 residues within 4Å: Chain A: S.62, A.63, T.64, T.88, W.89, S.91, V.134, D.160, A.162, H.163, S.183, H.185, K.188, G.195, F.330 Chain B: K.241 17 PLIP interactions: 15 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:W.89, A:V.134, A:A.162 Hydrogen bonds: A:A.63, A:T.64, A:H.163, A:S.183, A:H.185, A:K.188, A:K.188 Water bridges: A:T.64, A:T.64, A:W.89, A:E.194, B:K.241 Salt bridges: A:K.188, B:K.241 PMP.2: 16 residues within 4Å: Chain A: K.241 Chain B: S.62, A.63, T.64, T.88, W.89, S.91, V.134, D.160, A.162, H.163, S.183, H.185, K.188, G.195, F.330 15 PLIP interactions: 13 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:W.89, B:V.134, B:A.162 Hydrogen bonds: B:A.63, B:T.64, B:T.64, B:H.163, B:S.183, B:H.185, B:K.188, B:K.188 Water bridges: B:W.89, A:K.241 Salt bridges: B:K.188, A:K.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noland, B.W. et al., Structural studies of Salmonella typhimurium ArnB (PmrH) aminotransferase: A 4-amino-4-deoxy-L-arabinose lipopolysaccharide modifying enzyme. Structure (2002)

Release Date

2002-12-11

Peptides

ArnB aminotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ArnB aminotransferase

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