SMTL ID : 1mfa.1

STRUCTURE OF A SINGLE-CHAIN FV FRAGMENT COMPLEXED WITH A CARBOHYDRATE ANTIGEN AT 1.7 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MMA- GLA- ABE: alpha-D-galactopyranose-(1-2)-[alpha-D-Abequopyranose-(1-3)]methyl alpha-D-mannopyranoside

MMA-GLA-ABE.1: 10 residues within 4Å: Chain A: H.34, W.93, N.96, W.98 Chain B: W.33, H.35, F.59, G.100, H.101, G.102 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.33, B:F.59, A:W.93, A:W.98 Hydrogen bonds: B:G.100, B:G.102, A:W.98, A:W.93, B:H.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zdanov, A. et al., Structure of a single-chain antibody variable domain (Fv) fragment complexed with a carbohydrate antigen at1.7-A resolution. Proc.Natl.Acad.Sci.USA (1994)

Release Date

1994-01-31

Peptides

IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN): A
IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN)

IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN)