SMTL ID : 1mfm.1

MONOMERIC HUMAN SOD MUTANT F50E/G51E/E133Q AT ATOMIC RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.63, H.71, H.80, D.83, K.136 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.63, A:H.71, A:H.80, A:D.83, A:D.83

1 x CU: COPPER (II) ION(Non-covalent)

CU.2: 5 residues within 4Å: Chain A: H.46, H.48, H.63, H.120 Ligands: CD.11 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.46, A:H.48, A:H.120

9 x CD: CADMIUM ION(Non-covalent)

CD.3: 2 residues within 4Å: Chain A: E.51, D.52 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.51, H2O.1 CD.4: 4 residues within 4Å: Chain A: E.121, S.142 Ligands: CL.12, CL.13 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.121, A:S.142, H2O.4, H2O.5 CD.5: 2 residues within 4Å: Chain A: E.50, D.52 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.50, A:E.50, A:D.52 CD.6: 2 residues within 4Å: Chain A: H.110 Ligands: CD.9 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.110, H2O.2, H2O.3, H2O.9 CD.7: 1 residues within 4Å: Chain A: E.24 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.24, A:E.24, H2O.1, H2O.6, H2O.11 CD.8: 1 residues within 4Å: Chain A: D.76 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.76, H2O.2, H2O.3, H2O.9 CD.9: 3 residues within 4Å: Chain A: D.109, H.110 Ligands: CD.6 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.109, H2O.1, H2O.7 CD.10: 1 residues within 4Å: Chain A: D.109 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.109, H2O.5, H2O.6, H2O.7, H2O.9 CD.11: 5 residues within 4Å: Chain A: H.46, H.48, H.63, H.120 Ligands: CU.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.46, A:H.48, A:H.63, A:H.120, H2O.1, H2O.3

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.12: 5 residues within 4Å: Chain A: E.121, G.141, S.142 Ligands: CD.4, CL.13 Ligand excluded by PLIP CL.13: 3 residues within 4Å: Chain A: S.142 Ligands: CD.4, CL.12 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferraroni, M. et al., The crystal structure of the monomeric human SOD mutant F50E/G51E/E133Q at atomic resolution. The enzyme mechanism revisited. J.Mol.Biol. (1999)

Release Date

1999-04-21

Peptides

PROTEIN (COPPER,ZINC SUPEROXIDE DISMUTASE): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (COPPER,ZINC SUPEROXIDE DISMUTASE)

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