SMTL ID : 1mid.1

Non-specific lipid transfer protein 1 from barley in complex with L-alfa-lysophosphatidylcholine, Laudoyl

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

3 x LAP: [2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM(Non-covalent)

LAP.1: 9 residues within 4Å: Chain A: C.48, A.55, L.63, V.77, I.81, S.82, P.83, I.85 Ligands: LAP.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.55, A:L.63, A:V.77, A:I.81, A:I.81, A:I.85, A:I.85 LAP.2: 6 residues within 4Å: Chain A: D.7, M.10, L.14, V.17, I.54 Ligands: LAP.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.7, A:M.10, A:V.17, A:I.54 LAP.3: 13 residues within 4Å: Chain A: M.10, V.31, H.35, R.44, A.66, I.69, N.76, V.77, P.78, Y.79, I.81 Ligands: LAP.1, LAP.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.31, A:R.44, A:I.69, A:I.81 Water bridges: A:A.38, A:R.44, A:R.44 Salt bridges: A:H.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Henriksen, A., Binding of L-alfa-lysophosphatidylcholine, lauroyl in the hydrophobic channel of barley lipid transfer protein. To be Published

Release Date

2004-04-06

Peptides

nonspecific lipid-transfer protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

nonspecific lipid-transfer protein 1

Related Entries With Identical Sequence