SMTL ID : 1mj3.1

Crystal Structure Analysis of rat enoyl-CoA hydratase in complex with hexadienoyl-CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-hexamer

Ligands

5 x HXC: HEXANOYL-COENZYME A(Non-covalent)

HXC.1: 25 residues within 4Å: Chain A: K.26, A.27, L.28, A.30, K.62, A.66, G.67, A.68, D.69, I.70, K.71, M.73, L.87, Y.107, L.109, G.110, G.111, P.133, E.134, L.137, G.142, A.143, R.167 Chain B: F.249, K.252 21 PLIP interactions: 18 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:L.28, A:A.68, A:L.87, A:Y.107, A:L.109, A:P.133, A:A.143 Hydrogen bonds: A:A.66, A:A.68, A:A.68, A:I.70, A:K.71, A:G.111, A:E.134, B:K.252 Water bridges: A:K.62, A:K.62 Salt bridges: A:K.62, A:K.71, B:K.252 pi-Stacking: B:F.249 HXC.2: 22 residues within 4Å: Chain B: K.26, A.27, L.28, A.30, A.66, G.67, A.68, D.69, I.70, K.71, M.73, L.109, G.110, G.111, P.133, E.134, L.137, G.142, R.167 Chain C: F.233, F.249, K.252 17 PLIP interactions: 12 interactions with chain B, 5 interactions with chain C Hydrophobic interactions: B:A.68, B:L.109, B:P.133, C:F.233 Hydrogen bonds: B:A.66, B:A.68, B:A.68, B:I.70, B:K.71, B:G.111, B:E.134, C:K.252 Salt bridges: B:K.62, B:K.71, C:K.252, C:K.252 pi-Stacking: C:F.249 HXC.3: 23 residues within 4Å: Chain A: F.249, K.252 Chain C: K.26, A.27, L.28, A.30, K.62, A.66, G.67, A.68, D.69, I.70, K.71, M.73, Y.107, L.109, G.110, G.111, P.133, E.134, L.137, G.142, R.167 16 PLIP interactions: 11 interactions with chain C, 5 interactions with chain A Hydrophobic interactions: C:A.68, C:L.109 Hydrogen bonds: C:A.66, C:A.66, C:A.68, C:I.70, C:K.71, C:G.111 Water bridges: C:R.24, A:K.252, A:K.252 Salt bridges: C:K.62, C:K.71, A:K.252, A:K.252 pi-Stacking: A:F.249 HXC.4: 26 residues within 4Å: Chain E: K.26, A.27, L.28, A.30, K.62, A.66, G.67, A.68, D.69, I.70, K.71, M.73, L.87, Y.107, L.109, G.110, G.111, P.133, E.134, L.137, G.142, A.143, R.167 Chain F: F.233, F.249, K.252 17 PLIP interactions: 14 interactions with chain E, 3 interactions with chain F Hydrophobic interactions: E:A.68, E:L.87, E:Y.107, E:L.109, E:P.133, E:A.143, F:F.233 Hydrogen bonds: E:A.66, E:A.68, E:A.68, E:I.70, E:K.71, E:G.111, F:K.252 Salt bridges: E:K.62, E:K.71, F:K.252 HXC.5: 24 residues within 4Å: Chain D: F.249, K.252 Chain F: K.26, A.27, L.28, A.30, K.62, A.66, G.67, A.68, D.69, I.70, K.71, M.73, L.87, Y.107, L.109, G.110, G.111, P.133, E.134, L.137, G.142, R.167 17 PLIP interactions: 13 interactions with chain F, 4 interactions with chain D Hydrophobic interactions: F:L.28, F:A.68, F:L.87, F:L.109 Hydrogen bonds: F:A.66, F:A.68, F:A.68, F:I.70, F:K.71, F:G.111, F:E.134, D:K.252 Salt bridges: F:K.62, F:K.71, D:K.252 pi-Stacking: D:F.249, D:F.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bell, A.F. et al., Stereoselectivity of Enoyl-CoA Hydratase Results from Preferential Activation of One of Two Bound Substrate Conformers. Chem.Biol. (2002)

Release Date

2002-09-24

Peptides

ENOYL-COA HYDRATASE, MITOCHONDRIAL: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

ENOYL-COA HYDRATASE, MITOCHONDRIAL