SMTL ID : 1mki.2 (1 other biounit)

Crystal Structure of Bacillus Subtilis Probable Glutaminase, APC1040

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: F.265, K.319 Ligands: EDO.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.319 EDO.2: 5 residues within 4Å: Chain A: K.261, Y.262, G.315, M.316 Ligands: EDO.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.261 EDO.3: 3 residues within 4Å: Chain A: D.98, N.191, F.192 No protein-ligand interaction detected (PLIP) EDO.5: 4 residues within 4Å: Chain B: K.261, Y.262, F.265, G.315 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.261 EDO.6: 3 residues within 4Å: Chain C: F.265, K.319 Ligands: EDO.7 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:K.319 EDO.7: 5 residues within 4Å: Chain C: K.261, Y.262, G.315, M.316 Ligands: EDO.6 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:K.261 EDO.8: 3 residues within 4Å: Chain C: D.98, N.191, F.192 No protein-ligand interaction detected (PLIP) EDO.10: 4 residues within 4Å: Chain D: K.261, Y.262, F.265, G.315 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:K.261

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.4: 3 residues within 4Å: Chain A: D.101, E.103, F.124 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Water bridges: B:N.257 Hydrogen bonds: A:D.101 FMT.9: 3 residues within 4Å: Chain C: D.101, E.103, F.124 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:D.101 Water bridges: D:N.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brown, G. et al., Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis. Biochemistry (2008)

Release Date

2003-06-03

Peptides

Probable Glutaminase ybgJ: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Probable Glutaminase ybgJ

Related Entries With Identical Sequence