SMTL ID : 1mnc.1

STRUCTURE OF HUMAN NEUTROPHIL COLLAGENASE REVEALS LARGE S1' SPECIFICITY POCKET

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.117, H.121, H.127 Ligands: PLH.4 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.117, A:H.121, A:H.127 ZN.2: 4 residues within 4Å: Chain A: H.67, D.69, H.82, H.95 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.67, A:D.69, A:H.82, A:H.95

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.74, G.75, N.77, I.79, D.97, E.100 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.74, A:G.75, A:N.77, A:I.79, A:D.97, A:E.100

1 x PLH: METHYLAMINO-PHENYLALANYL-LEUCYL-HYDROXAMIC ACID(Non-covalent)

PLH.4: 16 residues within 4Å: Chain A: G.78, I.79, L.80, A.81, H.82, Y.109, V.114, H.117, E.118, H.121, H.127, Y.136, P.137, N.138, Y.139 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.79, A:V.114 Hydrogen bonds: A:G.78, A:A.81, A:P.137, A:Y.139 Water bridges: A:A.83, A:A.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stams, T. et al., Structure of human neutrophil collagenase reveals large S1' specificity pocket. Nat.Struct.Biol. (1994)

Release Date

1995-02-07

Peptides

NEUTROPHIL COLLAGENASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NEUTROPHIL COLLAGENASE