SMTL ID : 1mq8.2 (1 other biounit)

Crystal structure of alphaL I domain in complex with ICAM-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: A.117, N.118 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 4 residues within 4Å: Chain A: T.85, F.173, E.174, N.175 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: N.103, T.145 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.145 NAG.4: 4 residues within 4Å: Chain A: G.154, N.156, P.179, Q.181 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.156

1 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 5 residues within 4Å: Chain A: E.34 Chain B: S.10, S.12, T.77, E.112 6 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: B:S.10, B:S.12, B:T.77, A:E.34, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shimaoka, M. et al., Structures of the aL I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation. Cell(Cambridge,Mass.) (2003)

Release Date

2003-01-14

Peptides

intercellular adhesion molecule-1: A
Integrin alpha-L: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

intercellular adhesion molecule-1

Integrin alpha-L

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