SMTL ID : 1mtb.1

Viability of a drug-resistant HIV-1 protease mutant: structural insights for better antiviral therapy

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x ROC: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide(Non-covalent)

ROC.1: 22 residues within 4Å: Chain A: N.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, T.80, P.81, I.84 Chain B: R.8, N.25, G.27, D.30, V.32, I.47, G.48, G.49, I.50, P.81 20 PLIP interactions: 7 interactions with chain B, 13 interactions with chain A Hydrophobic interactions: B:D.30, B:V.32, B:I.47, B:I.50, B:P.81, A:I.50, A:P.81, A:I.84 Hydrogen bonds: B:N.25, A:N.25, A:G.27, A:G.27, A:D.29, A:D.30, A:D.30, A:G.48 Water bridges: B:D.29, A:G.48, A:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prabu-Jeyabalan, M. et al., Viability of drug-resistant human immunodeficiency virus type 1 protease variant: structural insights for better antiviral therapy. J.Virol. (2003)

Release Date

2003-01-07

Peptides

PROTEASE RETROPEPSIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE RETROPEPSIN