SMTL ID : 1muy.1

CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: R.58, F.59, D.64, N.67, A.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.58, A:R.58 GOL.5: 5 residues within 4Å: Chain B: R.58, F.59, D.64, N.67, A.68 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.58, B:R.58

2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.2: 9 residues within 4Å: Chain A: R.147, I.191, C.192, P.197, C.199, C.202, Q.205, C.208, A.211 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.192, A:C.199, A:C.202, A:C.208 SF4.6: 9 residues within 4Å: Chain B: R.147, I.191, C.192, P.197, C.199, C.202, Q.205, C.208, A.211 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.192, B:C.199, B:C.202, B:C.208

4 x IMD: IMIDAZOLE(Non-covalent)

IMD.3: 7 residues within 4Å: Chain A: E.37, S.120, T.121, A.124, I.136, D.138, M.185 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.120 IMD.4: 6 residues within 4Å: Chain A: A.3, S.4, S.7, Q.170, V.171, P.173 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.7 IMD.7: 7 residues within 4Å: Chain B: E.37, S.120, T.121, A.124, I.136, D.138, M.185 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.120 IMD.8: 6 residues within 4Å: Chain B: A.3, S.4, S.7, Q.170, V.171, P.173 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guan, Y. et al., MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily. Nat.Struct.Biol. (1998)

Release Date

1999-08-20

Peptides

ADENINE GLYCOSYLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ADENINE GLYCOSYLASE

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