SMTL ID : 1n2l.1

Crystal structure of a covalent intermediate of endogenous human arylsulfatase A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: H.124, R.125, F.126, A.165, N.166, F.186 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.125 NAG-NAG.4: 6 residues within 4Å: Chain B: H.124, R.125, F.126, A.165, N.166, F.186 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.125

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: Q.139, N.140 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.139, A:N.140 NAG.5: 2 residues within 4Å: Chain B: Q.139, N.140 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.139, B:N.140

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: D.11, D.12, S.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.11, A:D.12, A:D.263, A:D.263 CA.6: 5 residues within 4Å: Chain B: D.11, D.12, S.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.11, B:D.12, B:D.263, B:D.263

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chruszcz, M. et al., Crystal structure of a covalent intermediate of endogenous human arylsulfatase A. J.Inorg.Biochem. (2003)

Release Date

2003-12-23

Peptides

ARYLSULFATASE A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ARYLSULFATASE A

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