SMTL ID : 1n41.1

Crystal Structure of Annexin V K27E Mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: M.26, G.28, G.30, E.70 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.26, A:G.28, A:G.30, A:E.70, A:E.70 CA.2: 6 residues within 4Å: Chain A: L.98, G.100, A.101, G.102, T.103, D.142 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:L.98, A:G.100, A:G.102 CA.3: 5 residues within 4Å: Chain A: G.181, K.184, G.186, E.226 Ligands: SO4.7 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.181, A:K.184, A:G.186, A:E.226, H2O.1 CA.4: 3 residues within 4Å: Chain A: D.224, T.227, E.232 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.224, A:D.224, A:T.227, A:E.232, H2O.8 CA.5: 4 residues within 4Å: Chain A: M.257, G.259, G.261, D.301 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:G.259, A:G.261, A:D.301, A:D.301

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 4 residues within 4Å: Chain A: R.23, E.27, G.28, R.61 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.28 Water bridges: A:R.23 Salt bridges: A:R.23, A:R.61 SO4.7: 6 residues within 4Å: Chain A: K.184, W.185, G.186, T.187, E.226 Ligands: CA.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.186, A:G.186 Water bridges: A:T.187 SO4.8: 3 residues within 4Å: Chain A: S.303, G.304, K.307 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.304 Salt bridges: A:K.307

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mo, Y.D. et al., Interfacial basic cluster in annexin V couples phospholipid binding and trimer formation on membrane surfaces. J.Biol.Chem. (2003)

Release Date

2003-02-04

Peptides

annexin V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

annexin V