SMTL ID : 1n46.1

CRYSTAL STRUCTURE OF HUMAN TR BETA LIGAND-BINDING DOMAIN COMPLEXED WITH A POTENT SUBTYPE-SELECTIVE THYROMIMETIC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x PFA: [4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL(Non-covalent)

PFA.1: 18 residues within 4Å: Chain A: F.69, T.70, I.73, A.76, R.79, M.107, M.110, R.113, A.114, R.117, L.127, N.128, G.141, L.143, I.150, H.232, M.239, F.252 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.69, A:F.69, A:T.70, A:I.73, A:I.73, A:A.76, A:M.110, A:A.114, A:L.127, A:L.143, A:I.150 Hydrogen bonds: A:R.113, A:R.117, A:R.117, A:N.128, A:N.128 PFA.2: 20 residues within 4Å: Chain B: F.66, F.69, T.70, I.72, I.73, A.76, R.79, M.107, M.110, R.113, A.114, R.117, L.127, N.128, G.141, L.143, I.150, H.232, M.239, F.252 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:F.66, B:F.69, B:F.69, B:T.70, B:I.72, B:I.73, B:I.73, B:A.76, B:M.110, B:L.127, B:L.143, B:I.150 Hydrogen bonds: B:R.79, B:R.113, B:R.117, B:R.117, B:N.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dow, R.L. et al., Discovery of a Novel Series of 6-Azauracil-Based Thyroid Hormone Receptor Ligands:Potent, TRbeta Subtype-Selective Thyromimetics. Bioorg.Med.Chem.Lett. (2003)

Release Date

2003-04-22

Peptides

Thyroid hormone receptor Beta-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thyroid hormone receptor Beta-1