SMTL ID : 1n4w.1

ATOMIC RESOLUTION STRUCTURE OF CHOLESTEROL OXIDASE @ pH 7.3 (STREPTOMYCES SP. SA-COO)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.92 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 2 residues within 4Å: Chain A: N.147, H.154 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.154, H2O.19, H2O.31, H2O.31

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 45 residues within 4Å: Chain A: I.11, G.12, T.13, G.14, Y.15, G.16, A.17, L.34, E.35, M.36, G.37, L.91, Y.102, V.103, G.104, R.105, G.106, G.109, G.110, S.111, V.113, N.114, G.115, G.116, M.117, I.213, H.243, Q.244, V.245, G.283, A.284, G.285, S.286, G.288, L.292, Y.441, H.442, P.443, D.469, G.470, N.480, P.481, F.482, V.483, I.485 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:Y.102, A:V.113, A:Y.441, A:Y.441 Hydrogen bonds: A:G.12, A:T.13, A:T.13, A:G.14, A:Y.15, A:G.16, A:E.35, A:E.35, A:M.36, A:R.105, A:G.106, A:G.109, A:G.110, A:N.114, A:G.115, A:M.117, A:M.117, A:V.245, A:V.245, A:G.470, A:N.480, A:F.482 Water bridges: A:G.104, A:Q.244, A:Q.244, A:S.286, A:S.286, A:H.442, A:V.483

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: L.39, L.232, I.239 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.239, A:I.239 Water bridges: A:I.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyubimov, A.Y. et al., Atomic resolution crystallography reveals how changes in pH shape the protein microenvironment. Nat.Chem.Biol. (2006)

Release Date

2004-04-27

Peptides

Cholesterol oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cholesterol oxidase

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