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SMTL ID : 1n71.2
(2 other biounits)
Crystal structure of aminoglycoside 6'-acetyltransferase type Ii in complex with coenzyme A
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
homo-dimer
Ligands
5 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.1:
5 residues within 4Å:
Chain A:
K.153
Chain B:
Y.126
,
E.127
,
H.128
,
T.129
4
PLIP interactions
:
1 interactions with chain A
,
3 interactions with chain B
Salt bridges:
A:K.153
Hydrogen bonds:
B:H.128
,
B:T.129
,
B:T.129
SO4.2:
3 residues within 4Å:
Chain A:
H.116
,
Q.122
,
R.140
4
PLIP interactions
:
4 interactions with chain A
Hydrogen bonds:
A:Q.122
,
A:Q.122
,
A:R.140
Salt bridges:
A:H.116
SO4.3:
5 residues within 4Å:
Chain A:
Y.126
,
E.127
,
H.128
,
T.129
Chain B:
K.153
7
PLIP interactions
:
6 interactions with chain A
,
1 interactions with chain B
Hydrogen bonds:
A:E.127
,
A:H.128
,
A:H.128
,
A:T.129
,
A:T.129
Water bridges:
A:F.130
Salt bridges:
B:K.153
SO4.4:
3 residues within 4Å:
Chain A:
I.3
,
R.90
,
Y.94
2
PLIP interactions
:
2 interactions with chain A
Water bridges:
A:I.3
Salt bridges:
A:R.90
SO4.6:
2 residues within 4Å:
Chain B:
T.123
,
K.132
5
PLIP interactions
:
5 interactions with chain B
Hydrogen bonds:
B:T.123
Water bridges:
B:T.119
,
B:K.132
,
B:K.132
Salt bridges:
B:K.132
2 x
COA
:
COENZYME A
(Non-covalent)
COA.5:
21 residues within 4Å:
Chain A:
T.24
,
W.25
,
L.76
,
V.77
,
V.78
,
R.83
,
K.84
,
N.85
,
Q.86
,
I.87
,
G.88
,
T.89
,
T.111
,
N.138
,
E.141
,
H.142
,
P.143
,
E.145
,
F.146
,
Y.147
,
K.149
19
PLIP interactions
:
19 interactions with chain A
Hydrophobic interactions:
A:T.24
,
A:W.25
,
A:L.76
Hydrogen bonds:
A:L.76
,
A:V.78
,
A:K.84
,
A:N.85
,
A:Q.86
,
A:I.87
,
A:G.88
,
A:T.89
,
A:N.138
,
A:E.141
Water bridges:
A:R.83
,
A:K.84
,
A:N.85
,
A:E.141
Salt bridges:
A:K.149
pi-Cation interactions:
A:K.84
COA.7:
20 residues within 4Å:
Chain B:
W.25
,
L.76
,
V.78
,
R.83
,
K.84
,
N.85
,
Q.86
,
I.87
,
G.88
,
T.89
,
G.110
,
T.111
,
N.138
,
E.141
,
H.142
,
P.143
,
E.145
,
F.146
,
Y.147
,
K.149
18
PLIP interactions
:
18 interactions with chain B
Hydrophobic interactions:
B:W.25
,
B:L.76
,
B:P.143
Hydrogen bonds:
B:L.76
,
B:V.78
,
B:R.83
,
B:K.84
,
B:Q.86
,
B:Q.86
,
B:I.87
,
B:G.88
,
B:T.89
,
B:N.138
,
B:E.141
Water bridges:
B:K.84
,
B:N.85
,
B:N.85
Salt bridges:
B:K.149
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Burk, D.L. et al., X-ray structure of the AAC(6')-Ii antibiotic resistance enzyme at 1.8 A resolution; examination of oligomeric arrangements in GNAT superfamily members. Protein Sci. (2003)
Release Date
2003-03-18
Peptides
aac(6')-Ii:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D
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aac(6')-Ii
Related Entries With Identical Sequence
1n71.1
|
1n71.3
|
5e96.1
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
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Outline
Fog
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Transparent
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