SMTL ID : 1n76.1

CRYSTAL STRUCTURE OF HUMAN SEMINAL LACTOFERRIN AT 3.4 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: T.57, E.79, H.252, F.299, K.300 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.79

2 x FE: FE (III) ION(Non-covalent)

FE.2: 5 residues within 4Å: Chain A: D.59, Y.91, Y.191, H.252 Ligands: CO3.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.59, A:Y.91, A:Y.191, A:H.252 FE.3: 5 residues within 4Å: Chain A: D.394, Y.434, Y.527, H.596 Ligands: CO3.5 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.394, A:Y.434, A:Y.527, A:H.596

2 x CO3: CARBONATE ION(Non-functional Binders)

CO3.4: 10 residues within 4Å: Chain A: D.59, Y.91, T.116, R.120, T.121, A.122, G.123, Y.191, H.252 Ligands: FE.2 No protein-ligand interaction detected (PLIP) CO3.5: 10 residues within 4Å: Chain A: D.394, Y.434, T.460, R.464, T.465, A.466, G.467, Y.527, H.596 Ligands: FE.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.464, A:T.465, A:A.466, A:G.467

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, J. et al., Crystal Structure of human seminal lactoferrin at 3.4A resolution. Indian J.Biochem.Biophys. (2003)

Release Date

2003-02-18

Peptides

LACTOFERRIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LACTOFERRIN