SMTL ID : 1n9a.1

Farnesyltransferase complex with tetrahydropyridine inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain B: D.276, C.278, Y.340, H.341 Ligands: FTI.3 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.276, B:D.276, B:C.278, B:H.341

1 x HFP: ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID(Non-covalent)

HFP.2: 15 residues within 4Å: Chain A: K.110, Y.112, Y.146 Chain B: W.81, R.181, Y.184, H.227, G.229, Y.230, C.233, R.270, Y.279, W.282, Y.340 Ligands: FTI.3 9 PLIP interactions: 2 interactions with chain A, 7 interactions with chain B Hydrophobic interactions: A:Y.146, B:W.81, B:Y.184, B:Y.230, B:W.282 Hydrogen bonds: A:K.110, B:R.270, B:K.273, B:Y.279

1 x FTI: 1-{2-[3-(4-CYANO-BENZYL)-3H-IMIDAZOL-4-YL]-ACETYL}-5-NAPHTHALEN-1-YL-1,2,3,6-TETRAHYDRO-PYRIDINE-4-CARBONITRILE(Non-covalent)

FTI.3: 9 residues within 4Å: Chain A: Y.112 Chain B: L.75, W.85, R.181, D.276, D.338, Y.340 Ligands: ZN.1, HFP.2 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.75, B:W.85, B:W.85, A:Y.112 Hydrogen bonds: B:R.181, B:Y.340 pi-Stacking: B:Y.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gwaltney II, S.L. et al., Aryl tetrahydropyridine inhibitors of farnesyltransferase: bioavailable analogues with improved cellular potency. Bioorg.Med.Chem.Lett. (2003)

Release Date

2003-01-07

Peptides

Protein farnesyltransferase alpha subunit: A
Protein farnesyltransferase beta subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein farnesyltransferase alpha subunit

Protein farnesyltransferase beta subunit

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