SMTL ID : 1n9i.1

structure of earth-grown oxidized myoglobin mutant YQR (ISS8A)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.35, T.52, E.53, A.54 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.53, A:A.54 Salt bridges: A:K.35

1 x OH: HYDROXIDE ION(Non-covalent)

OH.2: 4 residues within 4Å: Chain A: Y.30, Q.65, V.69 Ligands: HEM.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.65

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.3: 19 residues within 4Å: Chain A: T.40, K.43, F.44, R.46, F.47, Q.65, R.68, V.69, A.72, L.90, S.93, H.94, H.98, I.100, Y.104, L.105, I.108, F.139 Ligands: OH.2 25 PLIP interactions: 24 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:F.44, A:F.44, A:F.44, A:V.69, A:V.69, A:A.72, A:L.90, A:L.90, A:I.100, A:Y.104, A:L.105, A:I.108, A:I.108, A:F.139 Hydrogen bonds: A:S.93 Water bridges: A:P.89, A:S.93, A:H.98 Salt bridges: A:R.46, A:H.94, A:K.97, A:H.98 pi-Stacking: A:H.98 Metal complexes: A:H.94, OH.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miele, A.E. et al., Analysis of the effect of microgravity on protein crystal quality: the case of a myoglobin triple mutant. Acta Crystallogr.,Sect.D (2003)

Release Date

2003-06-10

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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