SMTL ID : 1nae.1

Structure of CsCBM6-3 from Clostridium stercorarium in complex with xylotriose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x XYP- XYP- XYP: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose

XYP-XYP-XYP.1: 7 residues within 4Å: Chain A: F.62, G.72, Y.73, F.129, D.130, P.155, N.157 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.130, A:N.157 Water bridges: A:F.129

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: Q.47, E.49, S.69, D.159 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.49, A:S.69, A:D.159, A:D.159, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boraston, A.B. et al., Structure and ligand binding of carbohydrate-binding module CsCBM6-3 reveals similarities with fucose-specific lectins and "galactose-binding" domains. J.Mol.Biol. (2003)

Release Date

2003-03-18

Peptides

putative xylanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

putative xylanase

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