- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.3: 29 residues within 4Å:- Chain A: G.7, S.9, G.10, Y.11, I.12, D.31, N.32, L.33, C.34, N.35, S.36, G.57, D.58, I.59, R.60, F.80, A.81, G.82, K.84, N.99, S.122, S.123, S.124, Y.149, K.153, Y.177, F.178, P.180
- Ligands: EDO.5
29 PLIP interactions:29 interactions with chain A- Hydrophobic interactions: A:I.12, A:Y.177, A:P.180
- Hydrogen bonds: A:Y.11, A:I.12, A:N.32, A:N.32, A:L.33, A:C.34, A:N.35, A:N.35, A:S.36, A:I.59, A:F.80, A:G.82, A:N.99, A:S.122, A:Y.149, A:K.153, A:F.178
- Water bridges: A:G.10, A:G.13, A:L.83, A:N.99, A:T.126, A:T.126, A:K.153
- Salt bridges: A:K.84, A:K.84
NAD.9: 29 residues within 4Å:- Chain B: G.7, S.9, G.10, Y.11, I.12, D.31, N.32, L.33, C.34, N.35, S.36, G.57, D.58, I.59, R.60, F.80, A.81, G.82, K.84, N.99, S.122, S.123, S.124, Y.149, K.153, Y.177, F.178, P.180
- Ligands: EDO.11
29 PLIP interactions:29 interactions with chain B- Hydrophobic interactions: B:I.12, B:Y.177, B:P.180
- Hydrogen bonds: B:Y.11, B:I.12, B:N.32, B:N.32, B:L.33, B:C.34, B:N.35, B:N.35, B:S.36, B:I.59, B:F.80, B:G.82, B:N.99, B:S.122, B:Y.149, B:K.153, B:F.178
- Water bridges: B:G.10, B:G.13, B:L.83, B:N.99, B:T.126, B:T.126, B:K.153
- Salt bridges: B:K.84, B:K.84
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
UDP.4: 15 residues within 4Å:- Chain A: N.179, N.198, N.199, L.200, L.215, A.216, I.217, F.218, G.229, R.231, Y.233, V.269, R.292, D.295, Y.299
19 PLIP interactions:19 interactions with chain A- Hydrophobic interactions: A:F.218
- Hydrogen bonds: A:N.179, A:N.179, A:N.199, A:L.200, A:A.216, A:F.218, A:Y.233
- Water bridges: A:M.201, A:A.216, A:R.231, A:R.231, A:R.292, A:R.292, A:D.295, A:D.295
- Salt bridges: A:R.231, A:R.292, A:R.292
UDP.10: 15 residues within 4Å:- Chain B: N.179, N.198, N.199, L.200, L.215, A.216, I.217, F.218, G.229, R.231, Y.233, V.269, R.292, D.295, Y.299
18 PLIP interactions:18 interactions with chain B- Hydrophobic interactions: B:F.218
- Hydrogen bonds: B:N.179, B:N.179, B:N.199, B:L.200, B:A.216, B:F.218, B:Y.299
- Water bridges: B:M.201, B:A.216, B:R.231, B:R.231, B:R.231, B:R.292, B:R.292
- Salt bridges: B:R.231, B:R.292, B:R.292
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 7 residues within 4Å:- Chain A: Y.11, N.35, G.190, E.191, D.192, P.193
- Ligands: NAD.3
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.35, A:D.192
- Water bridges: A:G.10, A:N.35
EDO.11: 7 residues within 4Å:- Chain B: Y.11, N.35, G.190, E.191, D.192, P.193
- Ligands: NAD.9
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.35, B:D.192
- Water bridges: B:G.10, B:N.35
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Crystal structures of the oxidized and reduced forms of UDP-galactose 4-epimerase isolated from Escherichia coli. Biochemistry (1996)
- Release Date
- 1996-12-23
- Peptides
- UDP-GALACTOSE 4-EPIMERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Crystal structures of the oxidized and reduced forms of UDP-galactose 4-epimerase isolated from Escherichia coli. Biochemistry (1996)
- Release Date
- 1996-12-23
- Peptides
- UDP-GALACTOSE 4-EPIMERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A