SMTL ID : 1nf3.2 (2 other biounits)

Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.21, T.39 Ligands: GNP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.21, A:T.39, H2O.1, H2O.1

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.2: 21 residues within 4Å: Chain A: D.15, G.16, A.17, V.18, G.19, K.20, T.21, C.22, F.32, S.34, Y.36, P.38, T.39, G.64, Q.120, D.122, L.123, S.162, A.163, L.164 Ligands: MG.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:A.17, A:V.18, A:G.19, A:K.20, A:K.20, A:K.20, A:T.21, A:T.21, A:C.22, A:Y.36, A:T.39, A:G.64, A:Q.120, A:Q.120, A:A.163, A:L.164 Water bridges: A:T.21, A:L.65 Salt bridges: A:D.122 pi-Stacking: A:F.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garrard, S.M. et al., Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6. Embo J. (2003)

Release Date

2003-03-04

Peptides

G25K GTP-binding protein, placental isoform: A
PAR-6B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

G25K GTP-binding protein, placental isoform

PAR-6B

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