SMTL ID : 1niq.1

Solution Structure of the HOO-Bm bound BLMT, Transposon Tn5-encoding Bleomycin-binding Protein

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-functional Binders)

CU.1: 2 residues within 4Å: Chain A: L.113 Ligands: BLM.3 No protein-ligand interaction detected (PLIP) CU.2: 2 residues within 4Å: Chain B: L.113 Ligands: BLM.4 No protein-ligand interaction detected (PLIP)

2 x BLM: BLEOMYCIN A2(Covalent)

BLM.3: 31 residues within 4Å: Chain A: L.56, A.57, S.58, W.59, F.60, C.63, R.65, S.85, R.90, Q.97, E.98, W.99, G.100, M.103, A.105, L.113, R.115, A.123, G.124, I.125, S.126 Chain B: T.6, N.8, F.30, R.31, D.32, W.35, I.37, E.46, F.48 Ligands: CU.1 16 PLIP interactions: 11 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:W.59, A:A.105, A:L.113, B:F.30, B:D.32, B:W.35 Hydrogen bonds: A:L.56, A:S.58, A:R.65, A:R.90, A:Q.97, A:R.115, A:R.115 pi-Cation interactions: A:W.99 Salt bridges: B:D.32 pi-Stacking: B:W.35 BLM.4: 28 residues within 4Å: Chain A: T.6, N.8, F.30, R.31, D.32, W.35, I.37, E.46, F.48 Chain B: L.56, A.57, S.58, W.59, F.60, C.63, R.65, S.85, R.90, Q.97, E.98, W.99, G.100, M.103, A.105, L.113, R.115, I.117 Ligands: CU.2 13 PLIP interactions: 9 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:W.59, B:A.105, B:L.113, A:F.30, A:D.32, A:W.35 Hydrogen bonds: B:L.56, B:S.58, B:R.65, B:R.90, B:R.115, B:R.115 Salt bridges: A:D.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sugiyama, M., Solution Structure of the HOO-Bm bound BLMT, Transposon Tn5-encoding Bleomycin-binding Protein. To be published

Release Date

2003-12-25

Peptides

Bleomycin Resistance Protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Bleomycin Resistance Protein

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