SMTL ID : 1njd.1

THYMIDYLATE SYNTHASE, MUTATION, N229D WITH 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)

UMP.1: 15 residues within 4Å: Chain A: R.23, L.195, C.198, H.199, Q.217, R.218, S.219, A.220, D.221, G.225, D.229, H.259, Y.261 Chain B: R.178, R.179 10 PLIP interactions: 2 interactions with chain B, 8 interactions with chain A Salt bridges: B:R.178, B:R.179, A:R.23, A:R.218 Hydrogen bonds: A:Q.217, A:S.219, A:D.221, A:D.229, A:H.259 Water bridges: A:D.229 UMP.2: 15 residues within 4Å: Chain A: R.178, R.179 Chain B: R.23, L.195, C.198, H.199, Q.217, R.218, S.219, A.220, D.221, G.225, D.229, H.259, Y.261 10 PLIP interactions: 8 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Q.217, B:S.219, B:D.221, B:D.229, B:H.259, B:Y.261 Salt bridges: B:R.23, B:R.218, A:R.178, A:R.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Finer-Moore, J.S. et al., Partitioning roles of side chains in affinity, orientation, and catalysis with structures for mutant complexes: asparagine-229 in thymidylate synthase. Biochemistry (1996)

Release Date

1996-07-11

Peptides

THYMIDYLATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

THYMIDYLATE SYNTHASE

Related Entries With Identical Sequence