SMTL ID : 1nkm.1

Complex structure of HCMV Protease and a peptidomimetic inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

1 x 0FP: N-(6-AMINOHEXANOYL)-3-METHYL-L-VALYL-3-METHYL-L-VALYL-N~1~-[(2S,3S)-3-HYDROXY-4-OXO-4-{[(1R)-1-PHENYLPROPYL]AMINO}BUTAN-2-YL]-N~4~,N~4~-DIMETHYL-L-ASPARTAMIDE(Covalent)

0FP.1: 15 residues within 4Å: Chain A: E.31, L.32, N.62, H.63, S.132, L.133, S.134, S.135, R.136, K.156, C.161, V.163, G.164, R.165, I.231 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.32, A:K.156, A:R.165, A:R.165, A:I.231, A:I.231 Hydrogen bonds: A:L.133, A:S.135, A:S.135, A:K.156, A:V.163, A:R.165, A:R.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khayat, R. et al., Structural and Biochemical Studies of Inhibitor Binding to Human Cytomegalovirus Protease. Biochemistry (2003)

Release Date

2003-02-11

Peptides

Assemblin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Assemblin

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