SMTL ID : 1nqd.1

CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.65 ANGSTROM RESOLUTION IN PRESENCE OF CALCIUM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.13, E.15, S.36, D.41, D.44 Ligands: CA.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.13, A:S.36, A:D.44, A:D.44, H2O.2 CA.2: 7 residues within 4Å: Chain A: E.15, N.17, D.18, D.41, R.43, D.44 Ligands: CA.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.15, A:D.18, A:D.41, A:R.43, A:D.44 CA.3: 6 residues within 4Å: Chain B: E.13, E.15, S.36, D.41, D.44 Ligands: CA.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.13, B:S.36, B:D.41, B:D.44, H2O.9 CA.4: 7 residues within 4Å: Chain B: E.15, N.17, D.18, D.41, R.43, D.44 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.15, B:D.18, B:D.41, B:R.43, B:D.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilson, J.J. et al., A Bacterial Collagen-Binding Domain with Novel Calcium-Binding Motif Controls Domain Orientation. Embo J. (2003)

Release Date

2003-04-15

Peptides

class 1 collagenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

class 1 collagenase

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