- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-60-mer
- Ligands
- 60 x PO4: PHOSPHATE ION(Non-functional Binders)
- 60 x RDL: 6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE(Non-covalent)
RDL.6: 14 residues within 4Å:- Chain A: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain B: T.112, F.113
- Ligands: PO4.1
12 PLIP interactions:10 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:S.20, A:N.23, A:S.56, A:W.57, A:E.58, A:V.80, A:I.82, A:H.88, B:F.113, B:F.113
- pi-Stacking: A:F.22, A:F.22
RDL.7: 14 residues within 4Å:- Chain B: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain C: T.112, F.113
- Ligands: PO4.2
11 PLIP interactions:9 interactions with chain B, 2 interactions with chain C- Hydrogen bonds: B:N.23, B:S.56, B:W.57, B:E.58, B:V.80, B:I.82, B:H.88, C:F.113, C:F.113
- pi-Stacking: B:F.22, B:F.22
RDL.8: 14 residues within 4Å:- Chain C: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain D: T.112, F.113
- Ligands: PO4.3
12 PLIP interactions:10 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:N.23, C:S.56, C:W.57, C:E.58, C:V.80, C:I.82, C:H.88, D:F.113, D:F.113
- Water bridges: C:V.80, C:V.80
- pi-Stacking: C:F.22
RDL.9: 14 residues within 4Å:- Chain D: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain E: T.112, F.113
- Ligands: PO4.4
13 PLIP interactions:10 interactions with chain D, 3 interactions with chain E- Hydrogen bonds: D:S.20, D:N.23, D:S.56, D:W.57, D:E.58, D:V.80, D:I.82, E:F.113, E:F.113
- Water bridges: D:V.80, E:E.138
- pi-Stacking: D:F.22, D:F.22
RDL.10: 14 residues within 4Å:- Chain A: T.112, F.113
- Chain E: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Ligands: PO4.5
10 PLIP interactions:8 interactions with chain E, 2 interactions with chain A- Hydrogen bonds: E:S.20, E:N.23, E:S.56, E:W.57, E:E.58, E:V.80, E:I.82, A:F.113, A:F.113
- pi-Stacking: E:F.22
RDL.16: 14 residues within 4Å:- Chain F: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain G: T.112, F.113
- Ligands: PO4.11
12 PLIP interactions:10 interactions with chain F, 2 interactions with chain G- Hydrogen bonds: F:S.20, F:N.23, F:S.56, F:W.57, F:E.58, F:V.80, F:I.82, F:H.88, G:F.113, G:F.113
- pi-Stacking: F:F.22, F:F.22
RDL.17: 14 residues within 4Å:- Chain G: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain H: T.112, F.113
- Ligands: PO4.12
11 PLIP interactions:9 interactions with chain G, 2 interactions with chain H- Hydrogen bonds: G:N.23, G:S.56, G:W.57, G:E.58, G:V.80, G:I.82, G:H.88, H:F.113, H:F.113
- pi-Stacking: G:F.22, G:F.22
RDL.18: 14 residues within 4Å:- Chain H: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain I: T.112, F.113
- Ligands: PO4.13
12 PLIP interactions:10 interactions with chain H, 2 interactions with chain I- Hydrogen bonds: H:N.23, H:S.56, H:W.57, H:E.58, H:V.80, H:I.82, H:H.88, I:F.113, I:F.113
- Water bridges: H:V.80, H:V.80
- pi-Stacking: H:F.22
RDL.19: 14 residues within 4Å:- Chain I: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain J: T.112, F.113
- Ligands: PO4.14
13 PLIP interactions:10 interactions with chain I, 3 interactions with chain J- Hydrogen bonds: I:S.20, I:N.23, I:S.56, I:W.57, I:E.58, I:V.80, I:I.82, J:F.113, J:F.113
- Water bridges: I:V.80, J:E.138
- pi-Stacking: I:F.22, I:F.22
RDL.20: 14 residues within 4Å:- Chain F: T.112, F.113
- Chain J: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Ligands: PO4.15
10 PLIP interactions:8 interactions with chain J, 2 interactions with chain F- Hydrogen bonds: J:S.20, J:N.23, J:S.56, J:W.57, J:E.58, J:V.80, J:I.82, F:F.113, F:F.113
- pi-Stacking: J:F.22
RDL.26: 14 residues within 4Å:- Chain K: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain L: T.112, F.113
- Ligands: PO4.21
12 PLIP interactions:9 interactions with chain K, 3 interactions with chain L- Hydrogen bonds: K:S.20, K:N.23, K:S.56, K:W.57, K:E.58, K:V.80, K:I.82, L:F.113, L:F.113
- pi-Stacking: K:F.22, K:F.22
- Water bridges: L:E.138
RDL.27: 14 residues within 4Å:- Chain L: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain M: T.112, F.113
- Ligands: PO4.22
11 PLIP interactions:8 interactions with chain L, 3 interactions with chain M- Hydrogen bonds: L:N.23, L:S.56, L:W.57, L:E.58, L:V.80, L:I.82, M:F.113, M:F.113
- pi-Stacking: L:F.22, L:F.22
- Water bridges: M:E.138
RDL.28: 14 residues within 4Å:- Chain M: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain N: T.112, F.113
- Ligands: PO4.23
12 PLIP interactions:9 interactions with chain M, 3 interactions with chain N- Hydrogen bonds: M:N.23, M:S.56, M:W.57, M:E.58, M:V.80, M:I.82, N:F.113, N:F.113
- Water bridges: M:V.80, M:V.80, N:E.138
- pi-Stacking: M:F.22
RDL.29: 14 residues within 4Å:- Chain N: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Chain O: T.112, F.113
- Ligands: PO4.24
13 PLIP interactions:11 interactions with chain N, 2 interactions with chain O- Hydrogen bonds: N:S.20, N:N.23, N:S.56, N:W.57, N:E.58, N:V.80, N:I.82, N:H.88, O:F.113, O:F.113
- Water bridges: N:V.80
- pi-Stacking: N:F.22, N:F.22
RDL.30: 14 residues within 4Å:- Chain K: T.112, F.113
- Chain O: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92
- Ligands: PO4.25
12 PLIP interactions:3 interactions with chain K, 9 interactions with chain O- Hydrogen bonds: K:F.113, K:F.113, O:S.20, O:N.23, O:S.56, O:W.57, O:E.58, O:V.80, O:I.82, O:H.88
- Water bridges:
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-60-mer
- Ligands
- 60 x PO4: PHOSPHATE ION(Non-functional Binders)
- 60 x RDL: 6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE(Non-covalent)