SMTL ID : 1nqx.1

Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 3-(7-hydroxy-8-ribityllumazine-6-yl)propionic acid

PO4.1: 5 residues within 4Å: Chain A: G.84, A.85, T.86 Chain E: R.127 Ligands: RLP.6 Ligand excluded by PLIP PO4.2: 5 residues within 4Å: Chain A: R.127 Chain B: G.84, A.85, T.86 Ligands: RLP.7 Ligand excluded by PLIP PO4.3: 5 residues within 4Å: Chain B: R.127 Chain C: G.84, A.85, T.86 Ligands: RLP.8 Ligand excluded by PLIP PO4.4: 5 residues within 4Å: Chain C: R.127 Chain D: G.84, A.85, T.86 Ligands: RLP.9 Ligand excluded by PLIP PO4.5: 5 residues within 4Å: Chain D: R.127 Chain E: G.84, A.85, T.86 Ligands: RLP.10 Ligand excluded by PLIP PO4.11: 5 residues within 4Å: Chain F: G.84, A.85, T.86 Chain J: R.127 Ligands: RLP.16 Ligand excluded by PLIP PO4.12: 5 residues within 4Å: Chain F: R.127 Chain G: G.84, A.85, T.86 Ligands: RLP.17 Ligand excluded by PLIP PO4.13: 5 residues within 4Å: Chain G: R.127 Chain H: G.84, A.85, T.86 Ligands: RLP.18 Ligand excluded by PLIP PO4.14: 5 residues within 4Å: Chain H: R.127 Chain I: G.84, A.85, T.86 Ligands: RLP.19 Ligand excluded by PLIP PO4.15: 5 residues within 4Å: Chain I: R.127 Chain J: G.84, A.85, T.86 Ligands: RLP.20 Ligand excluded by PLIP PO4.21: 5 residues within 4Å: Chain K: G.84, A.85, T.86 Chain O: R.127 Ligands: RLP.26 Ligand excluded by PLIP PO4.22: 5 residues within 4Å: Chain K: R.127 Chain L: G.84, A.85, T.86 Ligands: RLP.27 Ligand excluded by PLIP PO4.23: 5 residues within 4Å: Chain L: R.127 Chain M: G.84, A.85, T.86 Ligands: RLP.28 Ligand excluded by PLIP PO4.24: 5 residues within 4Å: Chain M: R.127 Chain N: G.84, A.85, T.86 Ligands: RLP.29 Ligand excluded by PLIP PO4.25: 5 residues within 4Å: Chain N: R.127 Chain O: G.84, A.85, T.86 Ligands: RLP.30 Ligand excluded by PLIP PO4.31: 5 residues within 4Å: Chain P: G.84, A.85, T.86 Chain T: R.127 Ligands: RLP.36 Ligand excluded by PLIP PO4.32: 5 residues within 4Å: Chain P: R.127 Chain Q: G.84, A.85, T.86 Ligands: RLP.37 Ligand excluded by PLIP PO4.33: 5 residues within 4Å: Chain Q: R.127 Chain R: G.84, A.85, T.86 Ligands: RLP.38 Ligand excluded by PLIP PO4.34: 5 residues within 4Å: Chain R: R.127 Chain S: G.84, A.85, T.86 Ligands: RLP.39 Ligand excluded by PLIP PO4.35: 5 residues within 4Å: Chain S: R.127 Chain T: G.84, A.85, T.86 Ligands: RLP.40 Ligand excluded by PLIP PO4.41: 5 residues within 4Å: Chain U: G.84, A.85, T.86 Chain Y: R.127 Ligands: RLP.46 Ligand excluded by PLIP PO4.42: 5 residues within 4Å: Chain U: R.127 Chain V: G.84, A.85, T.86 Ligands: RLP.47 Ligand excluded by PLIP PO4.43: 5 residues within 4Å: Chain V: R.127 Chain W: G.84, A.85, T.86 Ligands: RLP.48 Ligand excluded by PLIP PO4.44: 5 residues within 4Å: Chain W: R.127 Chain X: G.84, A.85, T.86 Ligands: RLP.49 Ligand excluded by PLIP PO4.45: 5 residues within 4Å: Chain X: R.127 Chain Y: G.84, A.85, T.86 Ligands: RLP.50 Ligand excluded by PLIP PO4.51: 5 residues within 4Å: Chain 3: R.127 Chain Z: G.84, A.85, T.86 Ligands: RLP.56 Ligand excluded by PLIP PO4.52: 5 residues within 4Å: Chain 0: G.84, A.85, T.86 Chain Z: R.127 Ligands: RLP.57 Ligand excluded by PLIP PO4.53: 5 residues within 4Å: Chain 0: R.127 Chain 1: G.84, A.85, T.86 Ligands: RLP.58 Ligand excluded by PLIP PO4.54: 5 residues within 4Å: Chain 1: R.127 Chain 2: G.84, A.85, T.86 Ligands: RLP.59 Ligand excluded by PLIP PO4.55: 5 residues within 4Å: Chain 2: R.127 Chain 3: G.84, A.85, T.86 Ligands: RLP.60 Ligand excluded by PLIP PO4.61: 5 residues within 4Å: Chain 4: G.84, A.85, T.86 Chain 8: R.127 Ligands: RLP.66 Ligand excluded by PLIP PO4.62: 5 residues within 4Å: Chain 4: R.127 Chain 5: G.84, A.85, T.86 Ligands: RLP.67 Ligand excluded by PLIP PO4.63: 5 residues within 4Å: Chain 5: R.127 Chain 6: G.84, A.85, T.86 Ligands: RLP.68 Ligand excluded by PLIP PO4.64: 5 residues within 4Å: Chain 6: R.127 Chain 7: G.84, A.85, T.86 Ligands: RLP.69 Ligand excluded by PLIP PO4.65: 5 residues within 4Å: Chain 7: R.127 Chain 8: G.84, A.85, T.86 Ligands: RLP.70 Ligand excluded by PLIP PO4.71: 5 residues within 4Å: Chain 9: G.84, A.85, T.86 Ligands: RLP.76 Chain d: R.127 Ligand excluded by PLIP PO4.72: 5 residues within 4Å: Chain 9: R.127 Ligands: RLP.77 Chain a: G.84, A.85, T.86 Ligand excluded by PLIP PO4.73: 5 residues within 4Å: Ligands: RLP.78 Chain a: R.127 Chain b: G.84, A.85, T.86 Ligand excluded by PLIP PO4.74: 5 residues within 4Å: Ligands: RLP.79 Chain b: R.127 Chain c: G.84, A.85, T.86 Ligand excluded by PLIP PO4.75: 5 residues within 4Å: Ligands: RLP.80 Chain c: R.127 Chain d: G.84, A.85, T.86 Ligand excluded by PLIP PO4.81: 5 residues within 4Å: Ligands: RLP.86 Chain e: G.84, A.85, T.86 Chain i: R.127 Ligand excluded by PLIP PO4.82: 5 residues within 4Å: Ligands: RLP.87 Chain e: R.127 Chain f: G.84, A.85, T.86 Ligand excluded by PLIP PO4.83: 5 residues within 4Å: Ligands: RLP.88 Chain f: R.127 Chain g: G.84, A.85, T.86 Ligand excluded by PLIP PO4.84: 5 residues within 4Å: Ligands: RLP.89 Chain g: R.127 Chain h: G.84, A.85, T.86 Ligand excluded by PLIP PO4.85: 5 residues within 4Å: Ligands: RLP.90 Chain h: R.127 Chain i: G.84, A.85, T.86 Ligand excluded by PLIP PO4.91: 5 residues within 4Å: Ligands: RLP.96 Chain j: G.84, A.85, T.86 Chain n: R.127 Ligand excluded by PLIP PO4.92: 5 residues within 4Å: Ligands: RLP.97 Chain j: R.127 Chain k: G.84, A.85, T.86 Ligand excluded by PLIP PO4.93: 5 residues within 4Å: Ligands: RLP.98 Chain k: R.127 Chain l: G.84, A.85, T.86 Ligand excluded by PLIP PO4.94: 5 residues within 4Å: Ligands: RLP.99 Chain l: R.127 Chain m: G.84, A.85, T.86 Ligand excluded by PLIP PO4.95: 5 residues within 4Å: Ligands: RLP.100 Chain m: R.127 Chain n: G.84, A.85, T.86 Ligand excluded by PLIP PO4.101: 5 residues within 4Å: Ligands: RLP.106 Chain o: G.84, A.85, T.86 Chain s: R.127 Ligand excluded by PLIP PO4.102: 5 residues within 4Å: Ligands: RLP.107 Chain o: R.127 Chain p: G.84, A.85, T.86 Ligand excluded by PLIP PO4.103: 5 residues within 4Å: Ligands: RLP.108 Chain p: R.127 Chain q: G.84, A.85, T.86 Ligand excluded by PLIP PO4.104: 5 residues within 4Å: Ligands: RLP.109 Chain q: R.127 Chain r: G.84, A.85, T.86 Ligand excluded by PLIP PO4.105: 5 residues within 4Å: Ligands: RLP.110 Chain r: R.127 Chain s: G.84, A.85, T.86 Ligand excluded by PLIP PO4.111: 5 residues within 4Å: Ligands: RLP.116 Chain t: G.84, A.85, T.86 Chain x: R.127 Ligand excluded by PLIP PO4.112: 5 residues within 4Å: Ligands: RLP.117 Chain t: R.127 Chain u: G.84, A.85, T.86 Ligand excluded by PLIP PO4.113: 5 residues within 4Å: Ligands: RLP.118 Chain u: R.127 Chain v: G.84, A.85, T.86 Ligand excluded by PLIP PO4.114: 5 residues within 4Å: Ligands: RLP.119 Chain v: R.127 Chain w: G.84, A.85, T.86 Ligand excluded by PLIP PO4.115: 5 residues within 4Å: Ligands: RLP.120 Chain w: R.127 Chain x: G.84, A.85, T.86 Ligand excluded by PLIP

RLP.6: 16 residues within 4Å: Chain A: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92 Chain E: T.112, F.113, K.135, E.138 Ligands: PO4.1 14 PLIP interactions: 10 interactions with chain A, 4 interactions with chain E Hydrogen bonds: A:N.23, A:S.56, A:W.57, A:E.58, A:V.80, A:I.82, E:F.113, E:K.135, E:K.135 Water bridges: A:V.80 Salt bridges: A:H.88, E:K.135 pi-Stacking: A:F.22, A:F.22 RLP.7: 17 residues within 4Å: Chain A: T.112, F.113, K.135, E.138, S.142 Chain B: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92 Ligands: PO4.2 16 PLIP interactions: 12 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:S.20, B:N.23, B:S.56, B:W.57, B:E.58, B:V.80, B:I.82, A:F.113, A:K.135, A:K.135 Water bridges: B:V.80, B:V.80 Salt bridges: B:H.88, A:K.135 pi-Stacking: B:F.22, B:F.22 RLP.8: 15 residues within 4Å: Chain B: T.112, F.113, K.135, E.138 Chain C: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88 Ligands: PO4.3 17 PLIP interactions: 6 interactions with chain B, 11 interactions with chain C Hydrogen bonds: B:F.113, B:K.135, B:K.135, B:S.142, B:S.142, C:S.20, C:N.23, C:S.56, C:W.57, C:E.58, C:V.80, C:I.82 Salt bridges: B:K.135, C:H.88 Water bridges: C:V.80, C:V.80 pi-Stacking: C:F.22 RLP.9: 16 residues within 4Å: Chain C: T.112, F.113, K.135, E.138 Chain D: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92 Ligands: PO4.4 17 PLIP interactions: 10 interactions with chain D, 7 interactions with chain C Hydrogen bonds: D:N.23, D:S.56, D:W.57, D:E.58, D:V.80, D:I.82, C:F.113, C:K.135, C:K.135, C:S.142, C:S.142 Water bridges: D:V.80, D:V.80, C:E.138 Salt bridges: D:H.88, C:K.135 pi-Stacking: D:F.22 RLP.10: 16 residues within 4Å: Chain D: T.112, F.113, K.135, E.138 Chain E: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92 Ligands: PO4.5 14 PLIP interactions: 10 interactions with chain E, 4 interactions with chain D Hydrogen bonds: E:N.23, E:S.56, E:W.57, E:E.58, E:V.80, E:I.82, D:F.113, D:K.135, D:K.135 Water bridges: E:V.80 Salt bridges: E:H.88, D:K.135 pi-Stacking: E:F.22, E:F.22 RLP.16: 16 residues within 4Å: Chain F: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92 Chain J: T.112, F.113, K.135, E.138 Ligands: PO4.11 14 PLIP interactions: 10 interactions with chain F, 4 interactions with chain J Hydrogen bonds: F:N.23, F:S.56, F:W.57, F:E.58, F:V.80, F:I.82, J:F.113, J:K.135, J:K.135 Water bridges: F:V.80 Salt bridges: F:H.88, J:K.135 pi-Stacking: F:F.22, F:F.22 RLP.17: 17 residues within 4Å: Chain F: T.112, F.113, K.135, E.138, S.142 Chain G: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92 Ligands: PO4.12 16 PLIP interactions: 12 interactions with chain G, 4 interactions with chain F Hydrogen bonds: G:S.20, G:N.23, G:S.56, G:W.57, G:E.58, G:V.80, G:I.82, F:F.113, F:K.135, F:K.135 Water bridges: G:V.80, G:V.80 Salt bridges: G:H.88, F:K.135 pi-Stacking: G:F.22, G:F.22 RLP.18: 15 residues within 4Å: Chain G: T.112, F.113, K.135, E.138 Chain H: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88 Ligands: PO4.13 17 PLIP interactions: 6 interactions with chain G, 11 interactions with chain H Hydrogen bonds: G:F.113, G:K.135, G:K.135, G:S.142, G:S.142, H:S.20, H:N.23, H:S.56, H:W.57, H:E.58, H:V.80, H:I.82 Salt bridges: G:K.135, H:H.88 Water bridges: H:V.80, H:V.80 pi-Stacking: H:F.22 RLP.19: 16 residues within 4Å: Chain H: T.112, F.113, K.135, E.138 Chain I: F.22, N.23, G.55, S.56, W.57, E.58, V.80, L.81, I.82, H.88, I.92