SMTL ID : 1nr6.1

MICROSOMAL CYTOCHROME P450 2C5/3LVDH COMPLEX WITH DICLOFENAC

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.114, N.115 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.114, A:N.115 Water bridges: A:L.113, A:F.116 SO4.2: 4 residues within 4Å: Chain A: L.392, D.393, E.394, K.399 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.394 Water bridges: A:D.393, A:S.395 Salt bridges: A:K.399

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.3: 27 residues within 4Å: Chain A: R.79, I.94, A.95, W.102, R.106, L.273, A.276, G.277, T.280, T.281, T.284, Q.335, L.340, L.341, N.344, L.345, H.347, P.406, F.407, S.408, R.412, C.414, V.415, G.416, L.419, A.420 Ligands: DIF.4 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:L.340, A:L.341, A:L.345, A:F.407, A:V.415, A:V.415, A:L.419, A:L.419 Hydrogen bonds: A:A.95, A:N.344, A:S.408 Salt bridges: A:R.79, A:R.79, A:R.106, A:H.347, A:R.412 Metal complexes: A:C.414

1 x DIF: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID(Non-covalent)

DIF.4: 10 residues within 4Å: Chain A: L.85, A.95, F.96, G.275, A.276, T.280, L.341, L.345, F.455 Ligands: HEM.3 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.85, A:L.85, A:T.280, A:L.341, A:L.341, A:L.345, A:L.345, A:F.455 Hydrogen bonds: A:G.275 Water bridges: A:G.275 pi-Stacking: A:F.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

WESTER, M.R. et al., Structure of Mammalian Cytochrome P450 2C5 Complexed with Diclofenac at 2.1 A Resolution: Evidence for an Induced Fit Model of Substrate Binding. Biochemistry (2003)

Release Date

2003-08-12

Peptides

CYTOCHROME P450 2C5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME P450 2C5

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