SMTL ID : 1ns3.4 (3 other biounits)

STRUCTURE OF HCV PROTEASE (BK STRAIN)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-12-12-mer

Ligands

12 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.97, T.98, C.99, C.145, H.149 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:C.97, A:C.97, A:T.98, A:C.99, A:C.145 ZN.2: 4 residues within 4Å: Chain B: C.97, C.99, C.145, S.147 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:C.97, B:C.145 ZN.3: 5 residues within 4Å: Chain E: C.97, T.98, C.99, C.145, H.149 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:C.97, E:C.97, E:T.98, E:C.99, E:C.145 ZN.4: 4 residues within 4Å: Chain F: C.97, C.99, C.145, S.147 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:C.97, F:C.145 ZN.5: 5 residues within 4Å: Chain I: C.97, T.98, C.99, C.145, H.149 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:C.97, I:C.97, I:T.98, I:C.99, I:C.145 ZN.6: 4 residues within 4Å: Chain J: C.97, C.99, C.145, S.147 2 PLIP interactions: 2 interactions with chain J Metal complexes: J:C.97, J:C.145 ZN.7: 5 residues within 4Å: Chain M: C.97, T.98, C.99, C.145, H.149 5 PLIP interactions: 5 interactions with chain M Metal complexes: M:C.97, M:C.97, M:T.98, M:C.99, M:C.145 ZN.8: 4 residues within 4Å: Chain N: C.97, C.99, C.145, S.147 2 PLIP interactions: 2 interactions with chain N Metal complexes: N:C.97, N:C.145 ZN.9: 5 residues within 4Å: Chain Q: C.97, T.98, C.99, C.145, H.149 5 PLIP interactions: 5 interactions with chain Q Metal complexes: Q:C.97, Q:C.97, Q:T.98, Q:C.99, Q:C.145 ZN.10: 4 residues within 4Å: Chain R: C.97, C.99, C.145, S.147 2 PLIP interactions: 2 interactions with chain R Metal complexes: R:C.97, R:C.145 ZN.11: 5 residues within 4Å: Chain U: C.97, T.98, C.99, C.145, H.149 5 PLIP interactions: 5 interactions with chain U Metal complexes: U:C.97, U:C.97, U:T.98, U:C.99, U:C.145 ZN.12: 4 residues within 4Å: Chain V: C.97, C.99, C.145, S.147 2 PLIP interactions: 2 interactions with chain V Metal complexes: V:C.97, V:C.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, Y. et al., Complex of NS3 protease and NS4A peptide of BK strain hepatitis C virus: a 2.2 A resolution structure in a hexagonal crystal form. Protein Sci. (1998)

Release Date

1998-04-08

Peptides

NS3 PROTEASE: ABEFIJMNQRUV
NS4A PEPTIDE: CDGHKLOPSTWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E
A

F
B

I
A

J
B

M
A

N
B

Q
A

R
B

U
A

V
B

C
C

D
D

G
C

H
D

K
C

L
D

O
C

P
D

S
C

T
D

W
C

X
D

NS3 PROTEASE

NS4A PEPTIDE

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