- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 2 residues within 4Å:- Chain A: P.184, V.185
Ligand excluded by PLIPCL.3: 4 residues within 4Å:- Chain A: R.105, M.129, R.130, G.131
Ligand excluded by PLIPCL.7: 2 residues within 4Å:- Chain B: P.184, V.185
Ligand excluded by PLIPCL.8: 4 residues within 4Å:- Chain B: R.105, M.129, R.130, G.131
Ligand excluded by PLIP- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.4: 28 residues within 4Å:- Chain A: D.44, N.46, I.47, Y.51, E.81, K.84, G.114, G.115, V.116, D.119, T.139, T.140, L.142, D.146, S.147, K.152, K.161, N.162, F.179, T.182, L.183, P.184, E.187, N.190, E.194, H.287
- Ligands: ZN.1, CRB.5
19 PLIP interactions:19 interactions with chain A- Hydrophobic interactions: A:L.142
- Hydrogen bonds: A:D.44, A:N.46, A:E.81, A:K.84, A:G.114, A:G.115, A:V.116, A:T.139, A:K.152, A:K.161, A:K.161, A:N.162, A:T.182, A:T.182, A:E.187, A:N.190, A:K.250
- Water bridges: A:L.142
NAD.9: 28 residues within 4Å:- Chain B: D.44, N.46, I.47, Y.51, E.81, K.84, G.114, G.115, V.116, D.119, T.139, T.140, L.142, D.146, S.147, K.152, K.161, N.162, F.179, T.182, L.183, P.184, E.187, N.190, E.194, H.287
- Ligands: ZN.6, CRB.10
19 PLIP interactions:19 interactions with chain B- Hydrophobic interactions: B:L.142
- Hydrogen bonds: B:D.44, B:N.46, B:E.81, B:K.84, B:G.114, B:G.115, B:V.116, B:T.139, B:K.152, B:K.161, B:K.161, B:N.162, B:T.182, B:T.182, B:E.187, B:N.190, B:K.250
- Water bridges: B:L.142
- 2 x CRB: [1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID(Non-covalent)
CRB.5: 16 residues within 4Å:- Chain A: D.146, K.152, N.162, E.194, K.197, K.250, R.264, L.267, N.268, H.271, H.275, H.287, K.356
- Chain B: R.130
- Ligands: ZN.1, NAD.4
15 PLIP interactions:13 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:K.152
- Hydrogen bonds: A:K.152, A:N.162, A:K.197, A:K.197, A:R.264, A:L.267, A:N.268, A:N.268, A:K.356, B:R.130, B:R.130
- Salt bridges: A:K.152, A:K.250, A:R.264
CRB.10: 16 residues within 4Å:- Chain A: R.130
- Chain B: D.146, K.152, N.162, E.194, K.197, K.250, R.264, L.267, N.268, H.271, H.275, H.287, K.356
- Ligands: ZN.6, NAD.9
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:K.152
- Hydrogen bonds: B:K.152, B:N.162, B:K.197, B:K.197, B:R.264, B:L.267, B:N.268, B:N.268, B:K.356, A:R.130, A:R.130
- Salt bridges: B:K.152, B:K.250, B:R.264
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nichols, C.E. et al., Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase. J.MOL.BIOL. (2003)
- Release Date
- 2003-03-18
- Peptides
- 3-DEHYDROQUINATE SYNTHASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x CRB: [1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nichols, C.E. et al., Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase. J.MOL.BIOL. (2003)
- Release Date
- 2003-03-18
- Peptides
- 3-DEHYDROQUINATE SYNTHASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A