- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-8-4-mer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 20 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.2: 4 residues within 4Å:- Chain A: E.153, D.154, Y.157, R.161
Ligand excluded by PLIPPO4.4: 11 residues within 4Å:- Chain B: A.11, G.12, G.13, V.14, G.15, K.16, S.17, G.59, E.62
- Chain C: L.373, E.377
Ligand excluded by PLIPPO4.5: 5 residues within 4Å:- Chain C: V.59, R.60, H.130, H.134, H.135
Ligand excluded by PLIPPO4.6: 7 residues within 4Å:- Chain B: E.63
- Chain C: K.249, E.250, R.261
- Chain H: S.127, R.128, Q.131
Ligand excluded by PLIPPO4.7: 1 residues within 4Å:- Chain C: R.95
Ligand excluded by PLIPPO4.9: 4 residues within 4Å:- Chain D: E.153, D.154, Y.157, R.161
Ligand excluded by PLIPPO4.11: 11 residues within 4Å:- Chain E: A.11, G.12, G.13, V.14, G.15, K.16, S.17, G.59, E.62
- Chain F: L.373, E.377
Ligand excluded by PLIPPO4.12: 5 residues within 4Å:- Chain F: V.59, R.60, H.130, H.134, H.135
Ligand excluded by PLIPPO4.13: 7 residues within 4Å:- Chain E: E.63
- Chain F: K.249, E.250, R.261
- Chain K: S.127, R.128, Q.131
Ligand excluded by PLIPPO4.14: 1 residues within 4Å:- Chain F: R.95
Ligand excluded by PLIPPO4.16: 4 residues within 4Å:- Chain G: E.153, D.154, Y.157, R.161
Ligand excluded by PLIPPO4.18: 11 residues within 4Å:- Chain H: A.11, G.12, G.13, V.14, G.15, K.16, S.17, G.59, E.62
- Chain I: L.373, E.377
Ligand excluded by PLIPPO4.19: 5 residues within 4Å:- Chain I: V.59, R.60, H.130, H.134, H.135
Ligand excluded by PLIPPO4.20: 7 residues within 4Å:- Chain E: S.127, R.128, Q.131
- Chain H: E.63
- Chain I: K.249, E.250, R.261
Ligand excluded by PLIPPO4.21: 1 residues within 4Å:- Chain I: R.95
Ligand excluded by PLIPPO4.23: 4 residues within 4Å:- Chain J: E.153, D.154, Y.157, R.161
Ligand excluded by PLIPPO4.25: 11 residues within 4Å:- Chain K: A.11, G.12, G.13, V.14, G.15, K.16, S.17, G.59, E.62
- Chain L: L.373, E.377
Ligand excluded by PLIPPO4.26: 5 residues within 4Å:- Chain L: V.59, R.60, H.130, H.134, H.135
Ligand excluded by PLIPPO4.27: 7 residues within 4Å:- Chain B: S.127, R.128, Q.131
- Chain K: E.63
- Chain L: K.249, E.250, R.261
Ligand excluded by PLIPPO4.28: 1 residues within 4Å:- Chain L: R.95
Ligand excluded by PLIP- 4 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
GTP.3: 26 residues within 4Å:- Chain A: A.11, G.12, G.13, V.14, G.15, K.16, S.17, A.18, F.28, V.29, D.30, E.31, Y.32, P.34, T.35, G.59, G.60, E.62, N.116, K.117, D.119, L.120, S.145, A.146, K.147
- Ligands: MG.1
25 PLIP interactions:25 interactions with chain A- Hydrogen bonds: A:G.13, A:V.14, A:G.15, A:K.16, A:S.17, A:A.18, A:V.29, A:Y.32, A:T.35, A:G.60, A:E.62, A:N.116, A:K.117, A:K.117, A:A.146, A:K.147
- Water bridges: A:S.17, A:S.17, A:S.17, A:T.35
- Salt bridges: A:K.16, A:K.16, A:D.119
- pi-Stacking: A:F.28, A:F.28
GTP.10: 26 residues within 4Å:- Chain D: A.11, G.12, G.13, V.14, G.15, K.16, S.17, A.18, F.28, V.29, D.30, E.31, Y.32, P.34, T.35, G.59, G.60, E.62, N.116, K.117, D.119, L.120, S.145, A.146, K.147
- Ligands: MG.8
25 PLIP interactions:25 interactions with chain D- Hydrogen bonds: D:G.13, D:V.14, D:G.15, D:K.16, D:S.17, D:A.18, D:V.29, D:Y.32, D:T.35, D:G.60, D:E.62, D:N.116, D:K.117, D:K.117, D:A.146, D:K.147
- Water bridges: D:S.17, D:S.17, D:S.17, D:T.35
- Salt bridges: D:K.16, D:K.16, D:D.119
- pi-Stacking: D:F.28, D:F.28
GTP.17: 26 residues within 4Å:- Chain G: A.11, G.12, G.13, V.14, G.15, K.16, S.17, A.18, F.28, V.29, D.30, E.31, Y.32, P.34, T.35, G.59, G.60, E.62, N.116, K.117, D.119, L.120, S.145, A.146, K.147
- Ligands: MG.15
25 PLIP interactions:25 interactions with chain G- Hydrogen bonds: G:G.13, G:V.14, G:G.15, G:K.16, G:S.17, G:A.18, G:V.29, G:Y.32, G:T.35, G:G.60, G:E.62, G:N.116, G:K.117, G:K.117, G:A.146, G:K.147
- Water bridges: G:S.17, G:S.17, G:S.17, G:T.35
- Salt bridges: G:K.16, G:K.16, G:D.119
- pi-Stacking: G:F.28, G:F.28
GTP.24: 26 residues within 4Å:- Chain J: A.11, G.12, G.13, V.14, G.15, K.16, S.17, A.18, F.28, V.29, D.30, E.31, Y.32, P.34, T.35, G.59, G.60, E.62, N.116, K.117, D.119, L.120, S.145, A.146, K.147
- Ligands: MG.22
25 PLIP interactions:25 interactions with chain J- Hydrogen bonds: J:G.13, J:V.14, J:G.15, J:K.16, J:S.17, J:A.18, J:V.29, J:Y.32, J:T.35, J:G.60, J:E.62, J:N.116, J:K.117, J:K.117, J:A.146, J:K.147
- Water bridges: J:S.17, J:S.17, J:S.17, J:T.35
- Salt bridges: J:K.16, J:K.16, J:D.119
- pi-Stacking: J:F.28, J:F.28
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Margarit, S.M. et al., Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS. Cell(Cambridge,Mass.) (2003)
- Release Date
- 2003-04-01
- Peptides
- Transforming protein p21/H-RAS-1: ABDEGHJK
Son of sevenless protein homolog 1: CFIL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
QB
RD
QE
RG
QH
RJ
QK
RC
SF
SI
SL
S
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-8-4-mer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 20 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Margarit, S.M. et al., Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS. Cell(Cambridge,Mass.) (2003)
- Release Date
- 2003-04-01
- Peptides
- Transforming protein p21/H-RAS-1: ABDEGHJK
Son of sevenless protein homolog 1: CFIL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
QB
RD
QE
RG
QH
RJ
QK
RC
SF
SI
SL
S