SMTL ID : 1nxu.1

CRYSTAL STRUCTURE OF E. COLI HYPOTHETICAL OXIDOREDUCTASE YIAK NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER82.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: H.44, R.48, T.156, S.179, Y.180, G.181 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.180, A:G.181 Water bridges: A:T.156, A:T.156 Salt bridges: A:H.44, A:R.48 SO4.2: 8 residues within 4Å: Chain A: D.172, M.173, S.174, M.177, F.178, S.179, M.182 Chain B: K.225 9 PLIP interactions: 6 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:D.172, A:S.174, A:S.179, A:S.179 Water bridges: A:S.179, A:S.179, B:K.225, B:K.225 Salt bridges: B:K.225 SO4.3: 8 residues within 4Å: Chain A: K.225 Chain B: D.172, M.173, S.174, M.177, F.178, S.179, M.182 9 PLIP interactions: 6 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.174, B:S.179, B:S.179 Water bridges: B:D.172, B:S.179, B:S.179, A:K.225, A:K.225 Salt bridges: A:K.225 SO4.4: 6 residues within 4Å: Chain B: H.44, R.48, H.116, S.179, Y.180, G.181 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:Y.180, B:G.181 Water bridges: B:R.48, B:R.48, B:T.156, B:T.156 Salt bridges: B:H.44, B:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Forouhar, F. et al., A Novel NAD-binding Protein Revealed by the Crystal Structure of 2,3-Diketo-L-gulonate Reductase (YiaK). J.Biol.Chem. (2004)

Release Date

2003-03-11

Peptides

Hypothetical oxidoreductase yiaK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hypothetical oxidoreductase yiaK