SMTL ID : 1nzb.1

Crystal structure of wild type Cre recombinase-loxP synapse

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

10 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: G.18 No protein-ligand interaction detected (PLIP) MG.2: 4 residues within 4Å: Chain B: C.7 Chain E: Q.156, R.159, N.160 No protein-ligand interaction detected (PLIP) MG.3: 2 residues within 4Å: Chain B: T.8 Chain E: A.260 No protein-ligand interaction detected (PLIP) MG.4: 2 residues within 4Å: Chain B: A.5, A.6 No protein-ligand interaction detected (PLIP) MG.5: 1 residues within 4Å: Chain C: G.18 No protein-ligand interaction detected (PLIP) MG.6: 2 residues within 4Å: Chain A: T.26 Chain E: H.40 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:H.40 MG.7: 1 residues within 4Å: Chain E: H.269 No protein-ligand interaction detected (PLIP) MG.8: 1 residues within 4Å: Chain E: D.141 No protein-ligand interaction detected (PLIP) MG.11: 1 residues within 4Å: Chain H: Q.89 No protein-ligand interaction detected (PLIP) MG.12: 5 residues within 4Å: Chain C: T.12, A.13, T.14 Chain H: T.87, H.91 1 PLIP interactions: 1 interactions with chain H Metal complexes: H:H.91

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.9: 1 residues within 4Å: Chain F: A.260 Ligand excluded by PLIP IOD.10: 1 residues within 4Å: Chain H: A.260 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ennifar, E. et al., Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation. Nucleic Acids Res. (2003)

Release Date

2003-09-16

Peptides

Cre recombinase: EFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

E
A

F
B

G
E

H
F

Cre recombinase

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