SMTL ID : 1o1o.1

Deoxy hemoglobin (A,C:V1M,V62L; B,D:V1M,V67L)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: Y.42, F.43, H.45, F.46, H.58, K.61, L.62, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, V.132, L.136 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:Y.42, A:F.43, A:F.43, A:F.43, A:F.46, A:L.62, A:L.83, A:L.86, A:L.91, A:L.91, A:V.93, A:V.93, A:F.98, A:F.98, A:L.101, A:V.132, A:L.136 Salt bridges: A:H.45, A:K.61, A:K.61 Metal complexes: A:H.87 HEM.2: 16 residues within 4Å: Chain B: F.41, F.42, H.63, L.67, A.70, F.85, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, V.137, L.141 19 PLIP interactions: 19 interactions with chain B, Hydrophobic interactions: B:F.41, B:F.41, B:F.42, B:L.67, B:L.67, B:F.85, B:L.88, B:L.91, B:L.96, B:L.96, B:V.98, B:V.98, B:N.102, B:F.103, B:L.106, B:V.137, B:L.141 pi-Stacking: B:H.63 Metal complexes: B:H.92 HEM.3: 17 residues within 4Å: Chain C: Y.42, F.43, H.45, F.46, H.58, K.61, L.62, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, V.132, L.136 18 PLIP interactions: 18 interactions with chain C, Hydrophobic interactions: C:F.43, C:F.43, C:F.46, C:K.61, C:L.62, C:L.83, C:L.86, C:L.91, C:V.93, C:V.93, C:F.98, C:F.98, C:L.101, C:V.132, C:L.136 Salt bridges: C:H.45, C:K.61 Metal complexes: C:H.87 HEM.4: 15 residues within 4Å: Chain D: F.41, F.42, H.63, K.66, L.67, A.70, F.71, L.88, H.92, L.96, V.98, N.102, F.103, L.106, L.141 15 PLIP interactions: 15 interactions with chain D, Hydrophobic interactions: D:F.41, D:F.41, D:F.42, D:F.42, D:K.66, D:F.71, D:L.88, D:L.96, D:V.98, D:N.102, D:F.103, D:L.141 Water bridges: D:K.66 Salt bridges: D:K.66 Metal complexes: D:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

 - 

Release Date

2002-12-18

Peptides

Hemoglobin Alpha chain: AC
Hemoglobin beta chain: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Hemoglobin Alpha chain

Hemoglobin beta chain