SMTL ID : 1o5w.2 (1 other biounit)

The structure basis of specific recognitions for substrates and inhibitors of rat monoamine oxidase A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.1: 38 residues within 4Å: Chain A: I.27, G.28, G.29, G.30, I.31, S.32, G.33, L.50, E.51, A.52, R.53, G.57, G.58, R.59, T.60, G.74, G.75, A.76, Y.77, Q.82, S.250, P.251, V.252, A.280, I.281, P.282, K.313, W.405, Y.410, C.414, Y.415, G.442, T.443, G.451, Y.452, M.453, A.456 Ligands: MLG.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:K.313, A:W.405 Hydrogen bonds: A:G.29, A:G.29, A:S.32, A:G.33, A:A.52, A:R.53, A:G.57, A:R.59, A:G.75, A:A.76, A:Y.77, A:Y.77, A:V.252, A:V.252, A:T.443, A:G.451, A:M.453 Salt bridges: A:R.59, A:R.59 pi-Stacking: A:Y.410, A:Y.415 FAD.3: 38 residues within 4Å: Chain B: I.27, G.28, G.29, G.30, I.31, S.32, G.33, L.50, E.51, A.52, R.53, G.57, G.58, R.59, T.60, G.74, G.75, A.76, Y.77, Q.82, P.251, V.252, A.280, I.281, P.282, K.313, F.360, W.405, Y.410, C.414, Y.415, G.442, T.443, G.451, Y.452, M.453, A.456 Ligands: MLG.4 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:K.313, B:F.360, B:W.405 Hydrogen bonds: B:G.29, B:G.29, B:S.32, B:G.33, B:A.52, B:R.53, B:G.57, B:R.59, B:G.75, B:A.76, B:Y.77, B:Y.77, B:V.252, B:V.252, B:T.443, B:G.451, B:M.453 Salt bridges: B:R.59, B:R.59 pi-Stacking: B:Y.410, B:Y.415

2 x MLG: N-[3-(2,4-DICHLOROPHENOXY)PROPYL]-N-METHYL-N-PROP-2-YNYLAMINE(Non-covalent)

MLG.2: 11 residues within 4Å: Chain A: I.188, F.216, Q.223, C.331, I.333, I.343, T.344, L.345, Y.415, Y.452 Ligands: FAD.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.216, A:I.343, A:Y.415 Hydrogen bonds: A:Y.452 MLG.4: 11 residues within 4Å: Chain B: I.188, F.216, Q.223, C.331, I.333, I.343, T.344, L.345, Y.415, Y.452 Ligands: FAD.3 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.216, B:Q.223, B:Y.415

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, J. et al., Structure of rat monoamine oxidase a and its specific recognitions for substrates and inhibitors. J.Mol.Biol. (2004)

Release Date

2004-04-20

Peptides

Amine oxidase [flavin-containing] A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Amine oxidase [flavin-containing] A

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