SMTL ID : 1o6g.1

PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, D641N MUTANT WITH BOUND PEPTIDE LIGAND SUC-GLY-PRO

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x SIN: SUCCINIC ACID(Non-covalent)

SIN.1: 9 residues within 4Å: Chain A: F.173, M.235, C.255, I.591, A.594, W.595, R.643 Ligands: GLY.2, PRO.3 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.173, A:I.591

1 x GLY: GLYCINE(Non-covalent)

GLY.2: 4 residues within 4Å: Chain A: W.595, R.643 Ligands: SIN.1, PRO.3 2 PLIP interactions: 1 Ligand-Ligand interactions, 1 interactions with chain A Hydrogen bonds: P.3, A:R.643

1 x PRO: PROLINE(Non-covalent)

PRO.3: 9 residues within 4Å: Chain A: Y.473, F.476, S.554, N.555, W.595, Y.599, H.680 Ligands: SIN.1, GLY.2 8 PLIP interactions: 1 Ligand-Ligand interactions, 7 interactions with chain A Hydrogen bonds: G.2, A:Y.473, A:S.554, A:N.555 Hydrophobic interactions: A:F.476, A:W.595, A:W.595 Salt bridges: A:H.680

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Szeltner, Z. et al., Substrate-dependent competency of the catalytic triad of prolyl oligopeptidase. J. Biol. Chem. (2002)

Release Date

2002-11-18

Peptides

Prolyl endopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Prolyl endopeptidase