SMTL ID : 1o7k.1

human p47 PX domain complex with sulphates

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.51, F.52, T.53, R.98 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.53 Water bridges: A:Y.32, A:F.52, A:F.52, A:R.98, A:R.98 Salt bridges: A:R.51 SO4.2: 6 residues within 4Å: Chain A: H.59, K.63, R.78, H.82, L.83 Chain C: K.39 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:L.83 Salt bridges: A:H.59, A:K.63, A:R.78, A:H.82, C:K.39 SO4.3: 5 residues within 4Å: Chain B: Y.32, R.51, F.52, T.53, R.98 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:F.52, B:T.53, B:T.53, B:T.53, B:R.98 Water bridges: B:Y.32 Salt bridges: B:R.51 SO4.4: 7 residues within 4Å: Chain A: K.39 Chain B: H.59, K.63, R.78, P.81, H.82, L.83 10 PLIP interactions: 7 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:P.81, B:L.83 Water bridges: B:Y.56, A:K.39, A:K.39 Salt bridges: B:H.59, B:K.63, B:R.78, B:H.82, A:K.39 SO4.5: 5 residues within 4Å: Chain C: H.31, R.51, F.52, T.53, R.98 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:Y.32, C:T.53, C:T.53, C:T.53 Water bridges: C:F.52, C:F.52 Salt bridges: C:R.51, C:R.98 SO4.6: 6 residues within 4Å: Chain B: K.39 Chain C: H.59, K.63, R.78, H.82, L.83 8 PLIP interactions: 5 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:L.83 Salt bridges: C:H.59, C:K.63, C:R.78, C:H.82, B:K.39 Water bridges: B:K.39, B:K.39 SO4.7: 4 residues within 4Å: Chain B: E.23, K.24 Chain C: Q.92, R.93 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:K.24, C:Q.92 Salt bridges: C:R.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karathanassis, D. et al., Binding of the Px Domain of P47Phox to Phosphatidylinositol 3.4-Bisphosphate and Phosphatidic Acid is Masked by an Intramolecular Interaction. Embo J. (2002)

Release Date

2002-11-20

Peptides

NEUTROPHIL CYTOSOL FACTOR 1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

NEUTROPHIL CYTOSOL FACTOR 1