- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.33 Å
- Oligo State
- homo-hexamer
- Ligands
- 12 x MN3: MANGANESE (III) ION(Covalent)(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
CA.3: 6 residues within 4Å:- Chain A: D.57, D.61
- Chain F: N.218, S.220, G.222, S.225
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain F- Metal complexes: A:D.57, A:D.57, A:D.61, F:S.220, F:G.222
CA.10: 6 residues within 4Å:- Chain B: D.57, D.61
- Chain C: N.218, S.220, G.222, S.225
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain C- Metal complexes: B:D.57, B:D.57, B:D.61, C:S.220, C:G.222
CA.14: 6 residues within 4Å:- Chain B: N.218, S.220, G.222, S.225
- Chain C: D.57, D.61
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain C- Metal complexes: B:S.220, B:G.222, C:D.57, C:D.57, C:D.61
CA.18: 6 residues within 4Å:- Chain D: D.57, D.61
- Chain E: N.218, S.220, G.222, S.225
5 PLIP interactions:2 interactions with chain E, 3 interactions with chain D- Metal complexes: E:S.220, E:G.222, D:D.57, D:D.57, D:D.61
CA.22: 6 residues within 4Å:- Chain D: N.218, S.220, G.222, S.225
- Chain E: D.57, D.61
5 PLIP interactions:2 interactions with chain E, 2 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: E:D.57, E:D.61, D:S.220, D:G.222, H2O.35
CA.28: 6 residues within 4Å:- Chain A: N.218, S.220, G.222, S.225
- Chain F: D.57, D.61
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain F- Metal complexes: A:S.220, A:G.222, F:D.57, F:D.57, F:D.61
- 6 x O: OXYGEN ATOM(Non-covalent)
O.4: 8 residues within 4Å:- Chain A: E.35, E.66, H.69, E.148, E.178, H.181
- Ligands: MN3.1, MN3.2
2 PLIP interactions:2 interactions with chain A- Water bridges: A:E.178, A:E.178
O.11: 8 residues within 4Å:- Chain B: E.35, E.66, H.69, E.148, E.178, H.181
- Ligands: MN3.8, MN3.9
No protein-ligand interaction detected (PLIP)O.15: 8 residues within 4Å:- Chain C: E.35, E.66, H.69, E.148, E.178, H.181
- Ligands: MN3.12, MN3.13
No protein-ligand interaction detected (PLIP)O.19: 8 residues within 4Å:- Chain D: E.35, E.66, H.69, E.148, E.178, H.181
- Ligands: MN3.16, MN3.17
No protein-ligand interaction detected (PLIP)O.23: 8 residues within 4Å:- Chain E: E.35, E.66, H.69, E.148, E.178, H.181
- Ligands: MN3.20, MN3.21
1 PLIP interactions:1 interactions with chain E- Water bridges: E:E.178
O.29: 8 residues within 4Å:- Chain F: E.35, E.66, H.69, E.148, E.178, H.181
- Ligands: MN3.26, MN3.27
1 PLIP interactions:1 interactions with chain F- Water bridges: F:E.178
- 5 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
MES.5: 3 residues within 4Å:- Chain A: P.259, R.260
- Chain F: E.89
No protein-ligand interaction detected (PLIP)MES.24: 1 residues within 4Å:- Chain E: K.92
2 PLIP interactions:2 interactions with chain E- Water bridges: E:E.89
- Salt bridges: E:K.92
MES.25: 2 residues within 4Å:- Chain E: R.16, S.17
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:S.17
MES.30: 3 residues within 4Å:- Chain A: G.250, I.251
- Chain F: K.7
2 PLIP interactions:1 interactions with chain F, 1 interactions with chain A- Salt bridges: F:K.7
- Hydrogen bonds: A:I.251
MES.31: 4 residues within 4Å:- Chain B: E.89
- Chain C: R.260
- Chain F: S.160, R.168
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain F- Water bridges: C:R.260, C:R.260
- Salt bridges: F:R.168
- 2 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Whittaker, M.M. et al., Outer Sphere Mutagenesis of Lactobacillus Plantarum Manganese Catalase Disrupts the Cluster Core. Mechanistic Implications. Eur.J.Biochem. (2003)
- Release Date
- 2003-12-18
- Peptides
- Manganese catalase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.33 Å
- Oligo State
- homo-hexamer
- Ligands
- 12 x MN3: MANGANESE (III) ION(Covalent)(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
- 6 x O: OXYGEN ATOM(Non-covalent)
- 5 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Whittaker, M.M. et al., Outer Sphere Mutagenesis of Lactobacillus Plantarum Manganese Catalase Disrupts the Cluster Core. Mechanistic Implications. Eur.J.Biochem. (2003)
- Release Date
- 2003-12-18
- Peptides
- Manganese catalase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F