SMTL ID : 1oar.2 (3 other biounits)

Fv IgE SPE-7 in complex with Alizarin Red

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

hetero-oligomer

Ligands

1 x AZN: ALIZARIN RED(Non-covalent)

AZN.1: 9 residues within 4Å: Chain A: W.33, H.35, R.50, K.59, M.99, Y.105 Chain B: Y.34, N.36, W.93 12 PLIP interactions: 6 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:Y.34, B:W.93, B:W.93, A:W.33, A:Y.105, A:Y.105 pi-Stacking: B:W.93, B:W.93, B:W.93, A:Y.105 Hydrogen bonds: A:R.50 Salt bridges: A:K.59

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) NA.3: 4 residues within 4Å: Chain B: T.17, V.18, T.19 Ligands: CL.4 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.17

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 2 residues within 4Å: Chain B: T.19 Ligands: NA.3 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

James, L.C. et al., Antibody Multispecificity Mediated by Conformational Diversity. Science (2003)

Release Date

2004-01-15

Peptides

IMMUNOGLOBULIN E: A
IMMUNOGLOBULING E: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
M

IMMUNOGLOBULIN E

IMMUNOGLOBULING E

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