SMTL ID : 1od3.1

Structure of CSCBM6-3 From Clostridium stercorarium in complex with laminaribiose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.00 Å

Oligo State

monomer

Ligands

2 x BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose(Non-covalent)

BGC-BGC.1: 5 residues within 4Å: Chain A: G.72, Y.73, F.129, P.155, N.157 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.73, A:N.157, A:N.157 Water bridges: A:I.74, A:I.74 BGC-BGC.2: 6 residues within 4Å: Chain A: R.40, E.49, D.50, Y.51, D.52, I.61 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.40

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.3: 2 residues within 4Å: Chain A: S.140, N.141 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.141 Water bridges: A:N.141

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 4 residues within 4Å: Chain A: Q.47, E.49, S.69, D.159 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.49, A:S.69, A:D.159, A:D.159, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boraston, A.B. et al., Structure and Ligand Binding of Carbohydrate-Binding Module Cscbm6-3 Reveals Similarities with Fucose-Specific Lectins and Galactose-Binding Domains. J.Mol.Biol. (2003)

Release Date

2003-03-13

Peptides

PUTATIVE XYLANASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PUTATIVE XYLANASE

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