SMTL ID : 1odz.1 (1 other biounit)

Expansion of the glycosynthase repertoire to produce defined manno-oligosaccharides

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x MAN- BMA: beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose(Non-covalent)

MAN-BMA.1: 11 residues within 4Å: Chain A: L.76, E.84, H.106, W.125, E.175, Y.248, A.288, W.323, R.324, H.340, W.342 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.84, A:W.323, A:R.324, A:H.106, A:E.175, A:Y.248 Water bridges: A:E.175, A:A.288

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: E.30, H.34 Ligands: TRS.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.30, A:H.34

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 3 residues within 4Å: Chain A: E.30, H.34 Ligands: ZN.2 3 PLIP interactions: 3 interactions with chain A Water bridges: A:E.30, A:E.30, A:H.34

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 7 residues within 4Å: Chain A: R.32, S.35, I.36, R.315, E.316, I.317, F.367 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.317

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jahn, M. et al., Expansion of the Glycosynthase Repertoire to Produce Defined Manno-Oligosaccharides. Chem.Commun.(Camb.) (2003)

Release Date

2003-07-10

Peptides

Mannan endo-1,4-beta-mannosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mannan endo-1,4-beta-mannosidase

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