- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x MO: MOLYBDENUM ATOM(Non-covalent)
- 2 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x HEC: HEME C(Non-covalent)
HEC.5: 15 residues within 4Å:- Chain B: R.30, R.33, P.40, V.41, I.42, P.43, H.44, Y.49, R.57, C.58, C.61, H.62, C.98, H.102
- Ligands: HEC.6
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:I.42, B:Y.49, B:R.57
- Salt bridges: B:R.30, B:R.30, B:R.33
- pi-Stacking: B:H.44, B:H.44, B:H.44, B:H.62, B:H.62
- Metal complexes: B:H.44, B:H.62
HEC.6: 22 residues within 4Å:- Chain A: L.52, N.53, Y.58
- Chain B: R.33, Y.35, P.36, E.37, Q.38, P.40, L.59, H.62, M.74, I.75, S.76, H.79, R.95, Y.96, F.97, C.98, C.101, H.102
- Ligands: HEC.5
21 PLIP interactions:19 interactions with chain B, 2 interactions with chain A,- Hydrophobic interactions: B:P.40, B:L.59, B:H.62, B:I.75, A:L.52, A:Y.58
- Hydrogen bonds: B:E.37, B:Q.38, B:Q.38
- Salt bridges: B:R.33, B:R.33
- pi-Stacking: B:H.79, B:H.79, B:H.79, B:H.102, B:H.102
- pi-Cation interactions: B:H.79, B:R.95, B:H.102
- Metal complexes: B:H.79, B:H.102
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Arnoux, P. et al., Structural and Redox Plasticity in the Heterodimeric Periplasmic Nitrate Reductase. Nat.Struct.Biol. (2003)
- Release Date
- 2003-10-09
- Peptides
- PERIPLASMIC NITRATE REDUCTASE: A
DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
OB
P
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x MO: MOLYBDENUM ATOM(Non-covalent)
- 2 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x HEC: HEME C(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Arnoux, P. et al., Structural and Redox Plasticity in the Heterodimeric Periplasmic Nitrate Reductase. Nat.Struct.Biol. (2003)
- Release Date
- 2003-10-09
- Peptides
- PERIPLASMIC NITRATE REDUCTASE: A
DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
OB
P